| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2152 |
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| Symbol | |
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| ID | 3905542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2519963 |
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| End bp | 2521975 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879487 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_481253 |
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| Protein GI | 86740853 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.381885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGA GACAGGTGCG CATGATGCCA CGCATTCACG TCCTCATGAT CGAGGACAGC
GACGACGATG CCGTGCTCGT CATCGAACGA CTGCGACGCG GCGGTTTCGA GGTGACCTCC
GATCGGGTGG AGGACTCCGA GGCGGCCGCG TCGGTTCTCC GTACCCGGCC TCCGGACCTG
GTGATCTGCG ATTACCACAT GCCGGCGTTC GGCGCCGAGG CGGCCCTGAT GCAGCTGCGC
GCCAGCGGCC TCGATATCCC GTTCATCGTC GTCTCCGGCC AGGTCGGCGA GGAGACGGCG
GCGGCACTCA TGCGGGCCGG CGCGCACGAC TTCCTGCTCA AGGATCGCAT GAGCCGACTC
GTCCCCGCGG TGCAGCGCGA ACTGCGGGAG GCCGACGACC GGCAGAGACG ACGGCAGGCC
GAGGCCGCCC TACGACGCAG CGAGGAGCGG TTCCGGCTGC TCGCCGAGCA GGCGACGGAC
GTCCTCTTCC GCTGCCGGCT GTGCCCGCGG GCCGAGGTCG AGTACGTCAG CCCGGCGATC
AGGATGATCA CCGGCTACCC GCCCGAGGAC CTGTGCGGCC GCCCCGACAC CCTGTTCTCG
CTGGTCGACG AGGAGGACCG GCCCACCCTC AAGGGCTCGT GGCGCACGGC GAACCCCGAA
CCGCTGCGGG TCCGTTGGCA CCCGCGAGAG GGCGTCGAGG TCTGGACGGA GCAACGCGTG
GTCGGCGTCC ACGACGACCA GGGCCACCTC GTCGCGGTGC AGGGCATCCT GCGTGACGTG
ACCGAGCAGG TCCATGCCGA CGAGGAACGG GAGCGGCTGC GACGCCAGCT GGATCAGACC
GAGCGGCTGG AGTCCCTCGG CCGGCTCGCG GGCGGCGTGG CGCACGACTT CAACAACCTG
CTCGGCGTGA TCACCGGCTA TGCGGAGATC GTCCTCGACA CCCTTCCCGA CGACGACCCG
TGCCGGGCCG ACATGGACGA GATCAGCCGT GCCGCCGACC AGGCCGCCGG ACTGACCCGT
CAACTGCTCA CCTTCAGCCG GCAGGAGTCG TCGAAGCCGG AGACCCTCGA CCTCAACGCG
GTGGTCGAGG GGACGCGGAA CCTGCTGCGA CGCACCATCG GCGAGGACAT CGAGATCGTC
ACCCTCCTCG ATCCCGATCT CCACCCCGTC ACGATCGACC CGAGCAAGAT CCAACAGGTG
GTGATGAACC TGGTCGTCAA CTCCCGTGCG GCCATGCCCG ACGGCGGCCG CCTCACCCTC
AGCACGGCGA ACCTGGACCG GGACCGGGGC CCGTCTCCCG CGGACCGCCC GGCCGCGCAC
GGGCGGCCGT CGCCGGAAGA ACGCCCGAAG CGCGGCTGGG CCTGCCTGGC GGTCGCCGAC
ACCGGGTGCG GCATGAGCCC GGAGGTGATC CGTCGCGCCG TCGAACCCTT CTTCACCACC
AAGGGACCCG GTGAGGGGAC GGGACTCGGC CTCGCCACCG TCTACGGGGT GGTCAAGGCG
GCCGGCGGCG AGGTCGACAT CGAGTCCGAG GTCGGGAAGG GGACGACCAT CCGGATCCTG
CTGCCCGCCA CGGCGAGGAG CGGGCCCGCT CCCGTCGACA CCACCCGGGA CGACACCACC
CGGGACGACG CCACCCGCGG GCAGGGGAAG ACGATCCTCG TCGTCGAGGA CGACGCGGCC
GTGCGCGCCG TCACCACGCG CATCCTCGTA CGGTCCGGCT ACCTCGTCCA CGAGGCGGGT
TCCCCGGCCG AGGCCCTCGA CCGGTTCGGT CCCGGGACGA CGCGGATCGA CGCCCTGCTC
ACCGACGCGA TCATGCCCGG CATGACGGGC TACCAGCTCA TCGAACAGTT CCGTCGGACC
CGCCCCGAGC TGCCGGTCAT GCTGATGTCG GGCTACGCCG CCGGCGCCGA GAAGTCCGTG
GCCGGCTTCC CGCCCGGCGT CGCCCACCTC CAGAAGCCGT TCACCGCCCG CGCCCTTCTC
GACAGCCTGG AACGAACCCT GCACCCACGC TGA
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| Protein sequence | MTARQVRMMP RIHVLMIEDS DDDAVLVIER LRRGGFEVTS DRVEDSEAAA SVLRTRPPDL
VICDYHMPAF GAEAALMQLR ASGLDIPFIV VSGQVGEETA AALMRAGAHD FLLKDRMSRL
VPAVQRELRE ADDRQRRRQA EAALRRSEER FRLLAEQATD VLFRCRLCPR AEVEYVSPAI
RMITGYPPED LCGRPDTLFS LVDEEDRPTL KGSWRTANPE PLRVRWHPRE GVEVWTEQRV
VGVHDDQGHL VAVQGILRDV TEQVHADEER ERLRRQLDQT ERLESLGRLA GGVAHDFNNL
LGVITGYAEI VLDTLPDDDP CRADMDEISR AADQAAGLTR QLLTFSRQES SKPETLDLNA
VVEGTRNLLR RTIGEDIEIV TLLDPDLHPV TIDPSKIQQV VMNLVVNSRA AMPDGGRLTL
STANLDRDRG PSPADRPAAH GRPSPEERPK RGWACLAVAD TGCGMSPEVI RRAVEPFFTT
KGPGEGTGLG LATVYGVVKA AGGEVDIESE VGKGTTIRIL LPATARSGPA PVDTTRDDTT
RDDATRGQGK TILVVEDDAA VRAVTTRILV RSGYLVHEAG SPAEALDRFG PGTTRIDALL
TDAIMPGMTG YQLIEQFRRT RPELPVMLMS GYAAGAEKSV AGFPPGVAHL QKPFTARALL
DSLERTLHPR
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