| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1706 |
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| Symbol | |
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| ID | 5869486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1931206 |
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| End bp | 1932387 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546823 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_001667945 |
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| Protein GI | 167032714 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000168842 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAAAA CCAGTGCAAC GCTGCTGATC ATCGATGACG ACGACGTGGT CCGTGCGAGC
CTCGCCGCCT ACCTTGAAGA CAGTGGCTTC AGCGTCCTCC AGGCCGGTAA TGGCCAGCAG
GGGCTTCAGG TCTTCGAAGA ACACCAGCCC GACCTCGTGA TCTGCGATCT GCGCATGCCG
CAGATGGGCG GCCTCGAACT GATCCGCCAG GTCAGCGAGC GGGCGCCGCA GTTGCCGGTG
ATCGTGGTTT CCGGTGCCGG CGTCATGAGC GATGCGGTGG AAGCGTTGCG CCTGGGCGCC
GCCGACTACC TGATCAAGCC GCTGGAAGAC TTGGCCGTGC TTGAGCATTC GGTACGTCGT
GCCCTCGACC GCTCGCGCCT GGTGCTGGAA AACCAGCGCT ACCGCGACAA GCTCGAAGCG
GCCAACCGCG AACTGGAGGC CAGCCTGCAC CTGCTGCAGG AAGACCAGAC CGCCGGTCGC
CAGGTGCAGA TGAACATGTT GCCAGAAAGC CCTTGGGTGG CCGGTGAGTT TGCGTTCGAG
CACCAGATCA TTCCGTCGCT GTACCTGTCG GGTGATTTTG TCGATTACTT CCGCGTGGAC
GAGCGGCGCA TTGCCTTCTA CCTCGCCGAT GTTTCCGGGC ATGGCGCATC GTCGGCCTTT
GTCACGGTGC TTTTGAAATT CATGACCACG CGGCTCATGT TCGAGCTCAG GCGCAGCAAG
ATGCGCGAGT TCAAGCCGTC GGAAGTGCTC AGTCACATCA ACCGCGGCCT GATCAATAGC
AAGCTGGGCA AGCACGTAAC CATGGTCGGT GGGGTGATCG ACGAAGAGTC TGGTCTGTTG
ACCTACGCCG TCGGCGGCCA CTTGCCGCTG CCCGTGCTGC ATACCCCCGA GCACACTCGC
TACCTGGAAG GCCGTGGCCT GCCGGTGGGG CTGTTCGATG AGGCCACCTA CCAGGACTTG
GTCGTGGAGC TGCCCCCGCA GTTCAGCCTC AGCCTGATGT CCGATGGCAT TCTGGACCTT
TTGCCGGGTG ATACGCTCAA AGATAAAGAA GCCGCCTTGC CGGAAATCGT CAAGGCAGCA
GGTGGCAGCC TGGATGGGCT GCGTCAACGA TTTGGATTGG CTACGCTTGG GGAGATGCCG
GATGATATCG CCCTATTGGT GTTGAGCAGG AACCTTCAAT GA
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| Protein sequence | MQKTSATLLI IDDDDVVRAS LAAYLEDSGF SVLQAGNGQQ GLQVFEEHQP DLVICDLRMP
QMGGLELIRQ VSERAPQLPV IVVSGAGVMS DAVEALRLGA ADYLIKPLED LAVLEHSVRR
ALDRSRLVLE NQRYRDKLEA ANRELEASLH LLQEDQTAGR QVQMNMLPES PWVAGEFAFE
HQIIPSLYLS GDFVDYFRVD ERRIAFYLAD VSGHGASSAF VTVLLKFMTT RLMFELRRSK
MREFKPSEVL SHINRGLINS KLGKHVTMVG GVIDEESGLL TYAVGGHLPL PVLHTPEHTR
YLEGRGLPVG LFDEATYQDL VVELPPQFSL SLMSDGILDL LPGDTLKDKE AALPEIVKAA
GGSLDGLRQR FGLATLGEMP DDIALLVLSR NLQ
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