| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1287 |
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| Symbol | |
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| ID | 6355388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1386526 |
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| End bp | 1387884 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642668903 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_001943333 |
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| Protein GI | 189346804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.541874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA CCATCCTTGT GGTTGAAGAC GAAAGCGTTC AGCTTGAAAG CATTGCCGGT
TTTCTTTCGA AACAGGGGTA TCGGGTGCTG AAATCTTCAC GTCCGCTGAG AGCACTTGAA
ATCGCCGGGG ATGAGGCTGT CGATATTGTG CTTTCCGATT TCAGAATGCC TGAAATGAGC
GGCGTCGAGC TGCTTGCGAC AATGAAACGG CGTAACCCCG GTATCGAGGT TATCATTATG
ACCGCATACG GGAGCGTGGA ATCGGCTATC GAGGCAATGA AGCTCGGGGC GGCAGATTAC
ATCACCAAGC CTGTCGATCT TCACCGGCTT CAGATTATGA TCAGAAACAT CCTGGAGAGA
AAACAGCTCA TCAGCGAAAA CCGTCTCCTG CGAACGCAGC TTTCGGAACG GTTCGGTTTT
CAGGGAATCA TATCGCAATC CTCGACAATG GCTCAGGTAA TGAACATTGC CGGAAGGGTA
GCCTCCAGCA ATGCAACAGT GCTCGTCACC GGAGAAACCG GAACCGGCAA GGAGCTTATT
GCAAAGGCCG TCCATTTTTC AGGCTCCCGG CGTGAACAAC CCTTTATTGT CGTCAATTGC
GCGGCACTAC CGGAAACGTT ACTTGAAAGT GAGCTTTTCG GTCATGAAAA AGGGGCCTTT
ACCGGTGCGG ACAGGATGCG GAGGGGACGT TTTGAAATGG CAAAGGGCGG TACGCTGTTT
ATTGACGAAG TTGGCGAAAT ACCGCTTTCC CTGCAGGTCA AGCTGCTGAG GGTTCTGCAG
GAAAAAACAT ATGAGCGTGT AGGCAGTTCC ACTTCCCTTG TTGCCGATGT GCGGATCGTC
GCAGCGACAA ACCGTGATCT GGAATCGATG ATTCGCGAAG GCTCGTTCCG GTCGGATCTC
TATTACAGAC TCAATGTCGT CTCCATCAGG ATTCCTCCAT TGCGGGATCG TCGTGATGAC
ATCCCTCCGC TTATCGACGC ATTTATTCAG CGATTCAGCA AAGAAAACGA TAAACAGATT
ACCGGAATTT CAAGGGAGGC AATGGACGTG CTGATGAAAT ATTCCTACCC CGGCAATATC
CGTGAACTTG AAAATATCGT GCAGCAGTCC GTTGTGCTCT CCCGTTCCTC GACCATTACC
AGGGATGATC TGCCCATCAG GGTCTCGGAA CCTTATCCGG AAGCTTCGGG TAAGGATGAG
ATGCAGGGGA GCTTTACAGA AAAGGTAGAA GCATTCGAGC AGGCAATGAT TCTCGGTGCC
ATGAAAGCGA GCGGCAATGT GCAGACACGG GCAGCTGAAC AGCTTGGCAT CAGCGAGCGG
CACCTGCGAT ACAAGCTGAA AAAATATGAC TTGAAATAA
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| Protein sequence | MDYTILVVED ESVQLESIAG FLSKQGYRVL KSSRPLRALE IAGDEAVDIV LSDFRMPEMS
GVELLATMKR RNPGIEVIIM TAYGSVESAI EAMKLGAADY ITKPVDLHRL QIMIRNILER
KQLISENRLL RTQLSERFGF QGIISQSSTM AQVMNIAGRV ASSNATVLVT GETGTGKELI
AKAVHFSGSR REQPFIVVNC AALPETLLES ELFGHEKGAF TGADRMRRGR FEMAKGGTLF
IDEVGEIPLS LQVKLLRVLQ EKTYERVGSS TSLVADVRIV AATNRDLESM IREGSFRSDL
YYRLNVVSIR IPPLRDRRDD IPPLIDAFIQ RFSKENDKQI TGISREAMDV LMKYSYPGNI
RELENIVQQS VVLSRSSTIT RDDLPIRVSE PYPEASGKDE MQGSFTEKVE AFEQAMILGA
MKASGNVQTR AAEQLGISER HLRYKLKKYD LK
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