| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0828 |
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| Symbol | |
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| ID | 4460775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1026491 |
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| End bp | 1028194 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639701590 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_844960 |
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| Protein GI | 116748273 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGGCTC GGGGGTGCTG GTATTCTGAT TTCCATCGAT GTGGATCTGA TCAGGCCGGG
ACCACGGAAA CCAGCCGGCT CGGCGGTCCC GACGGGCTGG CGAGGCGCCT CGAACCGATC
GGGTACTCCT GGAGGAGGCC GGCAGTGGAG GAGAAAATGA CGGGCAAGAG TTGGAAAGTG
GTTCTCATCG ACGATGACCC CGAGATTCGC GAGACGATCG GCGGCGTTCT CCAAGACTCC
GGACACGAAG TCCTCACGGC GGGGGACGGC GACGCCGGCA TGGAATTGTG CGAACGGCAA
TCGCCCGATA TCGTCATCAC GGATATCCGT CACCCCGGCA TCGACGGTTT CGAGATCCTG
CGAAGGATCA AGACCGGCCG CCCCGATGTG GAAGTGATCG TCATGACCGT GCTCAGTGAG
ATCGAGCTTG CGATACAGGC CCTGCATCTG GATGCCTCGG ACTTCATCAC CAAGCCCATC
GCCAACGATG CTCTGACGGT GGCCGTGAAG CGCGCCAAGG ACCGCATCGC CACGCGCAAG
GAGCTCGGGG ATTACACCGC GCTGATTGAA GAACGATGGA TGCAAACCGC AGAGGAACTG
GCAAAGACGT TCGATATGCA AAAGTCGCTT ATCGAGAGCT CCATAGACGG GATTGCAGCC
TTTGACAGTG ACGGCAAGAC GGTGATCTTC AACAGGAGCA TGGAGCAAAT CCTCGGTTAC
GAACGCGGGA ACGTCATCGG GAAAATGTAC CTCAGCCAGT TCTTTTCACC CGGTGAGGCG
GAGAAATTCG AGCAGAAACT GAAATCCGAG GAATACGGCG GGAAGAGAAG ACTGTTCCTG
TTTGAATCCA TTCTTGTGGA CAAGTCGGGC GGCAAGGTCC CCTGCCAGCT TTCGGCAGCG
GCGATGTTTC AGAAAGAAGA GGAAACGGGG CTGGTGGTTT TTTTCAGAGA CCAGCGGGAA
ATCCGGAAGC TCATGCAGGA GGCCGCCGAT CAGGCCCGCC TGCTCCAACA GGACAAAATG
ATCTCCCTGG GCAGGCTTGC GGCGAGTGTG GTTCACGAAA TCAACAACCC GCTGGCCGGA
ATCCTCAACT ACGCCAGGCT CATGACGAAA ATGCTCGGCA AAGGCATGTT GGCGAGCGAA
TCCGTGACCA AGTTCCAAGG GTATTTGTCA CTGATGGAGA GCGAGTTGAG TCGCTGTTCG
AAAATCGTCT CCAACCTGCT CTCGTTTTCC CGGCAGTCTA CCTTGGAGTC GGCGCCGGTG
AAGGTCAACG AGCTCATCGC CAAAAGCATA ACGCTCTGCG AGCACAAGCT GAGTCTTCAA
AATATTCGGA TCGACACGGT CCTGTCCCCT GAGAATCCCG TGATTCCAGG GGATTTCAAT
CAGTTGGAGC AGTGCCTGAT CAACCTCATC TTTAACGCCA TGGATGCCAT GGAGACCGGC
GGTGTCCTCA CCCTCGAAAG CGCGCTCATC CCCGCGCAGA AAATCGTCGA AATACGCGTG
AGGGATACCG GTTGCGGCAT TGCAAAAGAA GACCTGATCT ACATCTTCGA TCCGTTCTTC
ACCACAAAGA AACAGGGAAA AGGGCTGGGC CTGGGACTCT CCACCACCTA TGGAATCATT
GACCGGCATC ACGGTGCCGT CAGCGTGGAA TCGGAACCGG GCAAAGGCAC CGTTTTCACC
ATCAAGCTTC CTCTGGGATC GTGA
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| Protein sequence | MRARGCWYSD FHRCGSDQAG TTETSRLGGP DGLARRLEPI GYSWRRPAVE EKMTGKSWKV
VLIDDDPEIR ETIGGVLQDS GHEVLTAGDG DAGMELCERQ SPDIVITDIR HPGIDGFEIL
RRIKTGRPDV EVIVMTVLSE IELAIQALHL DASDFITKPI ANDALTVAVK RAKDRIATRK
ELGDYTALIE ERWMQTAEEL AKTFDMQKSL IESSIDGIAA FDSDGKTVIF NRSMEQILGY
ERGNVIGKMY LSQFFSPGEA EKFEQKLKSE EYGGKRRLFL FESILVDKSG GKVPCQLSAA
AMFQKEEETG LVVFFRDQRE IRKLMQEAAD QARLLQQDKM ISLGRLAASV VHEINNPLAG
ILNYARLMTK MLGKGMLASE SVTKFQGYLS LMESELSRCS KIVSNLLSFS RQSTLESAPV
KVNELIAKSI TLCEHKLSLQ NIRIDTVLSP ENPVIPGDFN QLEQCLINLI FNAMDAMETG
GVLTLESALI PAQKIVEIRV RDTGCGIAKE DLIYIFDPFF TTKKQGKGLG LGLSTTYGII
DRHHGAVSVE SEPGKGTVFT IKLPLGS
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