Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0828 |
Symbol | |
ID | 4460775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1026491 |
End bp | 1028194 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701590 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_844960 |
Protein GI | 116748273 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGGCTC GGGGGTGCTG GTATTCTGAT TTCCATCGAT GTGGATCTGA TCAGGCCGGG ACCACGGAAA CCAGCCGGCT CGGCGGTCCC GACGGGCTGG CGAGGCGCCT CGAACCGATC GGGTACTCCT GGAGGAGGCC GGCAGTGGAG GAGAAAATGA CGGGCAAGAG TTGGAAAGTG GTTCTCATCG ACGATGACCC CGAGATTCGC GAGACGATCG GCGGCGTTCT CCAAGACTCC GGACACGAAG TCCTCACGGC GGGGGACGGC GACGCCGGCA TGGAATTGTG CGAACGGCAA TCGCCCGATA TCGTCATCAC GGATATCCGT CACCCCGGCA TCGACGGTTT CGAGATCCTG CGAAGGATCA AGACCGGCCG CCCCGATGTG GAAGTGATCG TCATGACCGT GCTCAGTGAG ATCGAGCTTG CGATACAGGC CCTGCATCTG GATGCCTCGG ACTTCATCAC CAAGCCCATC GCCAACGATG CTCTGACGGT GGCCGTGAAG CGCGCCAAGG ACCGCATCGC CACGCGCAAG GAGCTCGGGG ATTACACCGC GCTGATTGAA GAACGATGGA TGCAAACCGC AGAGGAACTG GCAAAGACGT TCGATATGCA AAAGTCGCTT ATCGAGAGCT CCATAGACGG GATTGCAGCC TTTGACAGTG ACGGCAAGAC GGTGATCTTC AACAGGAGCA TGGAGCAAAT CCTCGGTTAC GAACGCGGGA ACGTCATCGG GAAAATGTAC CTCAGCCAGT TCTTTTCACC CGGTGAGGCG GAGAAATTCG AGCAGAAACT GAAATCCGAG GAATACGGCG GGAAGAGAAG ACTGTTCCTG TTTGAATCCA TTCTTGTGGA CAAGTCGGGC GGCAAGGTCC CCTGCCAGCT TTCGGCAGCG GCGATGTTTC AGAAAGAAGA GGAAACGGGG CTGGTGGTTT TTTTCAGAGA CCAGCGGGAA ATCCGGAAGC TCATGCAGGA GGCCGCCGAT CAGGCCCGCC TGCTCCAACA GGACAAAATG ATCTCCCTGG GCAGGCTTGC GGCGAGTGTG GTTCACGAAA TCAACAACCC GCTGGCCGGA ATCCTCAACT ACGCCAGGCT CATGACGAAA ATGCTCGGCA AAGGCATGTT GGCGAGCGAA TCCGTGACCA AGTTCCAAGG GTATTTGTCA CTGATGGAGA GCGAGTTGAG TCGCTGTTCG AAAATCGTCT CCAACCTGCT CTCGTTTTCC CGGCAGTCTA CCTTGGAGTC GGCGCCGGTG AAGGTCAACG AGCTCATCGC CAAAAGCATA ACGCTCTGCG AGCACAAGCT GAGTCTTCAA AATATTCGGA TCGACACGGT CCTGTCCCCT GAGAATCCCG TGATTCCAGG GGATTTCAAT CAGTTGGAGC AGTGCCTGAT CAACCTCATC TTTAACGCCA TGGATGCCAT GGAGACCGGC GGTGTCCTCA CCCTCGAAAG CGCGCTCATC CCCGCGCAGA AAATCGTCGA AATACGCGTG AGGGATACCG GTTGCGGCAT TGCAAAAGAA GACCTGATCT ACATCTTCGA TCCGTTCTTC ACCACAAAGA AACAGGGAAA AGGGCTGGGC CTGGGACTCT CCACCACCTA TGGAATCATT GACCGGCATC ACGGTGCCGT CAGCGTGGAA TCGGAACCGG GCAAAGGCAC CGTTTTCACC ATCAAGCTTC CTCTGGGATC GTGA
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Protein sequence | MRARGCWYSD FHRCGSDQAG TTETSRLGGP DGLARRLEPI GYSWRRPAVE EKMTGKSWKV VLIDDDPEIR ETIGGVLQDS GHEVLTAGDG DAGMELCERQ SPDIVITDIR HPGIDGFEIL RRIKTGRPDV EVIVMTVLSE IELAIQALHL DASDFITKPI ANDALTVAVK RAKDRIATRK ELGDYTALIE ERWMQTAEEL AKTFDMQKSL IESSIDGIAA FDSDGKTVIF NRSMEQILGY ERGNVIGKMY LSQFFSPGEA EKFEQKLKSE EYGGKRRLFL FESILVDKSG GKVPCQLSAA AMFQKEEETG LVVFFRDQRE IRKLMQEAAD QARLLQQDKM ISLGRLAASV VHEINNPLAG ILNYARLMTK MLGKGMLASE SVTKFQGYLS LMESELSRCS KIVSNLLSFS RQSTLESAPV KVNELIAKSI TLCEHKLSLQ NIRIDTVLSP ENPVIPGDFN QLEQCLINLI FNAMDAMETG GVLTLESALI PAQKIVEIRV RDTGCGIAKE DLIYIFDPFF TTKKQGKGLG LGLSTTYGII DRHHGAVSVE SEPGKGTVFT IKLPLGS
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