Gene Dvul_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2096 
Symbol 
ID4662809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2436476 
End bp2438056 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content63% 
IMG OID639820339 
Productsignal transduction histidine kinase 
Protein accessionYP_967539 
Protein GI120603139 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0713574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGCG TTGCCATGGC GAGAGGCGGT GGGGTAAGGT CTGGAGCACG TCGAGAATCG 
GTTTCAGGAG TCCGCATGTA TCGCATACTC ATCGCCGACG ACGAGCCTGT CGTACGCTAC
ACGCTCGCAC TCTATCTCGA AGATGCGGGC TACCGGGTGC TACAGGCTGG CACGGTACGC
GAAGCACTCG ACCTGTTCGA TGCCGAGGGT GCCGACATCG CCTTCATCGA CTGGCACATG
CCGGGTGGGG GCGGGGCAGA GGCGTTGCCC CTGTTCGCCT CGCGCGCGCC CACGTTGCCT
GTGGTGGTCG TCTCGGGCAC CAACAACGTG AGCGATGTCA TCCGGGCGTT GCAACTTGGC
GCGTGGGATT TCATGACCAA GCCCATCGTC GACCTCGCCA TGGTGGAACA GACGCTGGAA
CGTTGCCTTG TCAGGGCGCG GCTTCTGCGG GACGAAGGAC GCCTTCGCGA ACACCTTGAG
GAGCAGGTGC TGCAACGTTC GCGCGAACTT GAGGAGGCCA ACGCCCAGCT GCGCCGTGAG
ATAGCCGAAC GGCGCGACTT CGAAGCGGCA CTCGGCGAGA GCGAAGCCAG ATTCCGCCAG
CTTGTGGAGA ACATCCACGA ACTCTTCTGG GTGCGCGATG TGTTCACGTG GCGGCTGCTC
TACATCAGCC CCGCCTGTGA GACCCTCTTC GGCGTCTCTC CCAAGCAGGT GATCGAAAAA
CCCGAGCTTC TGCATCACTT TCTCGCGCAG TCGAACCGCG AGAAGTTTGT GGAAGAGTTG
TTGCAGACCG TGCGGGCGGG TGAAGTCTTC GATGCCGAGG TGCAGGCGTG GGGGGCGCAT
GGTGATGATA TGGTCTTGCG GGTGCGGGCG TTTCCCGTGC GTGATGCTGC GGGCCACATC
TACCGTGTGG CGGGCGTCGC CGAGGATGTG ACGCAGCGGC GGCAGGCAGA GCGTCGCATT
CTCACGTCAC TGCGGGAGAA GGAGATCCTG CTCAAGGAAG TGCACCACCG GGTGAAGAAC
AACCTGCAAC TGGTGGTGAG CCTGCTCAAC CTTCAGGCGT CGTCGGTGTA CGATGTGCGC
GACCGTGCGC TGCTTCTCGA CAGTCGCAAC CGCATCGCGT CCATGGCGCT GGTGCACGAG
GAGCTCTACA GGTCCGACGA CCTGTCAGGA GTCGATTTCG CCGACTACCT GCCACGTCTT
GCCCGCAAGT TGCAATCTGC CTTCGTGATC GATGTGGAAC TCGACCTTCA GCTTGACGTG
GCTCCTGTCA TGCTACCCGT GGACATCGCC ATCCCCTGCG GGCTGATTCT CAACGAACTC
ATCGCCAACG CACTCAAGCA CGCGTTCGCG GAACGTGGGC ACGGCAGGCT TTCCGTGTCG
TTGCAATGTC AGGGCGGGCG AGCAGTCCTT GCCGTGGCAG ACGATGGCGT GGGGCTGCCT
GCACCGTTCG AGGCACTCGG TGAGCGGACT CTGGGGGTGC AGCTGGTACG TAGCCTCGTG
CAGCAGCTGG GAGGCGAGTT GCGGCAGCAA CCCGGCCCCG GTGCGCACAT CGTCATCTCG
TTTCCCGTGG GGGAGGTCTA G
 
Protein sequence
MRGVAMARGG GVRSGARRES VSGVRMYRIL IADDEPVVRY TLALYLEDAG YRVLQAGTVR 
EALDLFDAEG ADIAFIDWHM PGGGGAEALP LFASRAPTLP VVVVSGTNNV SDVIRALQLG
AWDFMTKPIV DLAMVEQTLE RCLVRARLLR DEGRLREHLE EQVLQRSREL EEANAQLRRE
IAERRDFEAA LGESEARFRQ LVENIHELFW VRDVFTWRLL YISPACETLF GVSPKQVIEK
PELLHHFLAQ SNREKFVEEL LQTVRAGEVF DAEVQAWGAH GDDMVLRVRA FPVRDAAGHI
YRVAGVAEDV TQRRQAERRI LTSLREKEIL LKEVHHRVKN NLQLVVSLLN LQASSVYDVR
DRALLLDSRN RIASMALVHE ELYRSDDLSG VDFADYLPRL ARKLQSAFVI DVELDLQLDV
APVMLPVDIA IPCGLILNEL IANALKHAFA ERGHGRLSVS LQCQGGRAVL AVADDGVGLP
APFEALGERT LGVQLVRSLV QQLGGELRQQ PGPGAHIVIS FPVGEV