| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1145 |
|---|
| Symbol | |
|---|
| ID | 6242643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1285407 |
|---|
| End bp | 1286879 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642592924 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001857380 |
|---|
| Protein GI | 186475910 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.894172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGC CCCCCGAAGT CCGGGTCCTG CTCGTTGAGG ACAACCCGAC GGACGCCCTG
CTCATCGAGG AAGCACTGTC CGATGTGCTG GAATTCCAGC ACCGCCTGTT CCATACAACC
CTTTTGTCCG ATGCGCTCGA TCGTATTCAA TCGATGCAAT TCGATATCGT GCTGCTGGAT
TTGGGATTGC CGGACGCACA AGGAATCGGC ACGTTCAGAA CCTTGCACCA GCATGCCGCC
GAACTGCCCG TCCTGGTGCT GACGGGACTT GAAGACATGT CGGTGGGGGT GAAGGCTATC
CAGGAGGGTG CACAGGACTA TCTGTCGAAG CGGGATATCA ACTCATCGGA ACTGGGTCGC
GCCATACGCT ACGCCATGGA GCGTCATCGG ATTGCGATGG CGCTCAAGGA AAGCGAGGAA
CGGTTTCAGC TCGCAGTCAG GGGGGCAAGC GCCGGATTGT GGGACTGGAA CCCGCAGACA
GGCGCCGTTT ATCTGTCGAC CCAGTACAAG GAAATCATGG GGTACGAGGG GCATGAACTG
CCCAACGACA GCCAGCCGAT TCTCGACTTT ATCCATCCCG ACGACATCGA ACGGGTCAAA
ACCCACCTCG CCGCGCACCT CGCGCAAAAA TGCAGCTATG AGATCGAATA CCGGATACGT
GTCAAGACGG GGCAGTACCG CTGGATGCAC GCACGAGGCC AGGCGCTGTG GAATCAGGCC
GGCGAACCCT ACCGTATGGT TGGATGGATT ATCGACGTCA CCGAACGTCG GCTGGCCGAC
GAAGCACTGC GTGAGTCGCG CGAAGAACTG AAGCGGCTGT CGGCGAACAT CCAGCGCGCC
CGTGAGGAGG AAAAAGCCCG GATTGCACGT GAACTGCACG ACGATCTCGG TCAACAACTG
GCTGCCCTCA AGATCGAATG CGCGAAAAAC GGCAACCGCG CCACAGATAT CGATGCGCCG
AAAGCAGGCG CCGATATGAA CAATATCTAC GCGCTGATCG ATCAACTGGT CGTCTCCGTA
CGACGCATAG CGACCGACCT GCGTCCCGCC ATGCTTGACG ATCTTGGACT GCTGCCCGCT
ATCGAGTGGT TTGTCGAACG GTTCTCGTCG CGATACCCGA TATCCGTCGT CCAGCACATC
GACGCGGAGG ATATCGACTT CAACCACGAC AGCTCCACGG CCGTGTTCCG GATCGTCCAG
GAGGCGCTCA CCAACGTGGC GCGTCATGCG GGCGCGACCC AGGTCACGCT GGAGATTTCC
AGCAGCGGAT CGCATTGTAT TGTGCGGGTC GCCGACAACG GGCACGGTTG CCGGAACGAT
GTTCGACCGT CGCCAAGCTC ATTCGGTTTA ATCGGCATGC GGGAGCGCGC CGCAGCGTTG
AGCGGCGAAC TGATCGTCCA GACCGCTCCC GGCCAGGGCT TCGCACTCAC CGTTTTGCTG
CCACGCTTCG CGGTTGAGAA CAAAAGCCCT TAG
|
|---|
| Protein sequence | MNAPPEVRVL LVEDNPTDAL LIEEALSDVL EFQHRLFHTT LLSDALDRIQ SMQFDIVLLD
LGLPDAQGIG TFRTLHQHAA ELPVLVLTGL EDMSVGVKAI QEGAQDYLSK RDINSSELGR
AIRYAMERHR IAMALKESEE RFQLAVRGAS AGLWDWNPQT GAVYLSTQYK EIMGYEGHEL
PNDSQPILDF IHPDDIERVK THLAAHLAQK CSYEIEYRIR VKTGQYRWMH ARGQALWNQA
GEPYRMVGWI IDVTERRLAD EALRESREEL KRLSANIQRA REEEKARIAR ELHDDLGQQL
AALKIECAKN GNRATDIDAP KAGADMNNIY ALIDQLVVSV RRIATDLRPA MLDDLGLLPA
IEWFVERFSS RYPISVVQHI DAEDIDFNHD SSTAVFRIVQ EALTNVARHA GATQVTLEIS
SSGSHCIVRV ADNGHGCRND VRPSPSSFGL IGMRERAAAL SGELIVQTAP GQGFALTVLL
PRFAVENKSP
|
|---|
| |