| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0811 |
|---|
| Symbol | ntrX |
|---|
| ID | 2685237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 869490 |
|---|
| End bp | 870860 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637125483 |
|---|
| Product | nitrogen regulation protein NtrX |
|---|
| Protein accession | NP_951868 |
|---|
| Protein GI | 39995917 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.686874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAA CGATACTCGT CGTGGACGAC GAACAGGACA TCCGCACGGC CCTGGCCGGC
ATTCTGGAGG ACGAGGGGTA CCGGACCGCC TTCGCGCGCG ACGGCGTCGA GGCCCTGGAG
ACGGTCCAGA AAGATCGGCC CGACCTGGTG CTTTTGGACA TCTGGATGCC CAGGCTGGAC
GGCATGGAGA CCCTCCAACG GCTCAAGACG GCCGACCCCG GCCTCACGGT GGTCATGATG
TCGGGCCACG GCACCATTGA AACGGCAGTG AAGTCCACCA AAATGGGGGC CTTCGACTTC
ATCGAGAAAC CCCTCTCCCT GGAAAAGATC CTGGTCACGG TCCGCAACGG CCTGGACGCA
GGACGGCTCC GGGCCGAGAA CGATTCGCTG CGCGCCCTGA GCTTCAGGGG ACACGAGATC
ATGGGGGAGT CGGAGGCCAT GGGACGGCTG CGGGAGCAAG TCCGGCTGGC CGGCCCGGCC
GACGCGCCGG TGCTCATCAC CGGCGAAAAC GGGGCCGGCA AGGAACTGGC GGCCCGGTCG
CTGCACTACC ACAGCCCCCG CCGCGACCGG CCCTTCGTGG AACTCGACTG CGCCGCCCTG
CCCGAAGAAC TCATCGAGAG CGAGCTCTTC GGCCACGAAA AGGGCTTTGC CGGTGCCGCG
ACCCAGAAAA AGGGGAAGCT CGACCTGGCC AACGGCGGCA CCATGTTTCT GGATGAGATC
GGCGACATGC CGCCCCGCGC CCAGGCGAAG CTCCTGCGCC TCATCCAGGA GCGGAAATTC
GAGCGGGCCG GTGGAACTAG GTCCATCGAG GCGGACGTGC GCATCATGGC CGCCAGCACG
AGGAATCTGG AGGAAGAGGT CCGGGCGGGC CGCTTCAGCC CCGACCTGTT TTACCGGCTG
AACGTGGTCA GCCTCGCGGT GCCGCCGCTG CGGGAGCGGC AGGATGACAT CGTGCCGCTG
GTGGAGCACT TCCTCGACAT CTTCGCCCGC CGGGAGGGCC AGGAACGCAA AACCATGCCT
CCCGAAGCCT TGGCCATCCT GGCCCGGCAC GACTGGCCCG GCAACGTGCG GGAGCTGCGT
ACCATCGTGG AGCGGCTCGT CATCATGACC CCGGGGCGGG TGATCACCCC GGACAGCATT
CCCCCGTCGA TTGGCGAAGG CGCGGGTCGC GAGGGAGTTC TGCCCCGAAG CGAGGCCGCC
CTGGAGCCCT CGTCGCTCCG AGAGGCACGG GAAGAATTCG AGCGGGAATT CATCATCCAG
AAACTGGAGG AGTACGGCTG GAACATCTCG CGCACCGCCG ACGCCATCGA GCTGGAGCGG
AGCAACCTCT ACCGCAAGAT GAAGAGTTAC GGGATCGACG CTAAAAAATG A
|
|---|
| Protein sequence | MNETILVVDD EQDIRTALAG ILEDEGYRTA FARDGVEALE TVQKDRPDLV LLDIWMPRLD
GMETLQRLKT ADPGLTVVMM SGHGTIETAV KSTKMGAFDF IEKPLSLEKI LVTVRNGLDA
GRLRAENDSL RALSFRGHEI MGESEAMGRL REQVRLAGPA DAPVLITGEN GAGKELAARS
LHYHSPRRDR PFVELDCAAL PEELIESELF GHEKGFAGAA TQKKGKLDLA NGGTMFLDEI
GDMPPRAQAK LLRLIQERKF ERAGGTRSIE ADVRIMAAST RNLEEEVRAG RFSPDLFYRL
NVVSLAVPPL RERQDDIVPL VEHFLDIFAR REGQERKTMP PEALAILARH DWPGNVRELR
TIVERLVIMT PGRVITPDSI PPSIGEGAGR EGVLPRSEAA LEPSSLREAR EEFEREFIIQ
KLEEYGWNIS RTADAIELER SNLYRKMKSY GIDAKK
|
|---|
| |