Gene Shewmr4_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1312 
Symbol 
ID4251332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1518801 
End bp1519904 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID638117897 
Productresponse regulator receiver protein 
Protein accessionYP_733448 
Protein GI113969655 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000399806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAA GTGATGTTTC TATTCTTTTG GTCGAAGACG ACCCAGTCTT TAGGCAAATC 
GTCGCCACTT TTTTAAGTGG CCGCGGTGCC GAAGTGGTAC AGGCCTGTGA TGGTGAGCAA
GGGCTGTCCA TTTTTAAGCA ACAGCGTTTC GATATCATAC TTGCCGATCT CAGCATGCCA
AAGCTTGGTG GCCTCGATAT GCTCAAAGAA ATGAGTAAAT TAGAGCCATT GGTGCCTTCA
ATTGTGATCT CGGGTAATAA CGTTATGGCG GATGTGGTAG AAGCCCTTCG CGTTGGAGCC
TGCGATTATC TCGTCAAACC TGTTCCAGAC TTATTTATCA TTGAGCAAGC CATTAAACAG
GGATTGCAAC GTAACCATTC GGACAACATC ACTCAAGCCG AGTTTGATGC TTTATCAAAC
CAAGAACTCA AGGACAACTT GGTTCTGTTA GAACAAAGCG TTGAAGCGGC AAAACAAGTT
CAGCAACAAC TTTTTCCGGC TTCCAACATT AGCTACCCAG CGGCAAAAGT CGATTACAGT
CTGTTTAAGA GTAGTGATAT CAGTAGTTAC TTTATTGATT CCACCATGGT GGGGAGTGAT
TATCTCATCA TGTATATGGC TCACCTTTAT CCTGAAGATA ACAGGGCGGC CTTTGCCTGT
GTATTACTGC GTAGCTTTGT GAACCAGAAG CTTAAGAGCT ACCGCAGTGG TCAAAGCAAG
ACCATTATCG AGCCATTCAA TATGTTAAGT TATTTGAACG AGCGTTTAGT TAAGTCTGGT
CTCGATATTA CCGTGGATAT TATTTACGTC GCCATCGAGT TAACCCGTTA CCGTGCTGCG
ATTGCGCAAG CAGGGAAGGG GCTGAGATGC TATTTGCGTA ATGACGAGGG GTTAAGCCCA
TTGGCGCTTT CAGATAGCTT ACAATTAGGC ATGTTGGATT GGGGCAAGCC TAGCATTCAG
TTTCGGACTA TATTGCCGCA GGAGCAGCTC TGTATTGCGA CCAGTGAACC CGAACATAAA
CAGCAGCTAT TAGAAAACCA ATTCAAAGGG CTCGTTTATG ATCCGCTGCT TCCTGCGGGT
GGTTTTTTGC AATTGAGCTT ATAA
 
Protein sequence
MALSDVSILL VEDDPVFRQI VATFLSGRGA EVVQACDGEQ GLSIFKQQRF DIILADLSMP 
KLGGLDMLKE MSKLEPLVPS IVISGNNVMA DVVEALRVGA CDYLVKPVPD LFIIEQAIKQ
GLQRNHSDNI TQAEFDALSN QELKDNLVLL EQSVEAAKQV QQQLFPASNI SYPAAKVDYS
LFKSSDISSY FIDSTMVGSD YLIMYMAHLY PEDNRAAFAC VLLRSFVNQK LKSYRSGQSK
TIIEPFNMLS YLNERLVKSG LDITVDIIYV AIELTRYRAA IAQAGKGLRC YLRNDEGLSP
LALSDSLQLG MLDWGKPSIQ FRTILPQEQL CIATSEPEHK QQLLENQFKG LVYDPLLPAG
GFLQLSL