| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1730 |
|---|
| Symbol | |
|---|
| ID | 7173645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 2114641 |
|---|
| End bp | 2116164 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643540245 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002436143 |
|---|
| Protein GI | 218886822 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 98 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCCAC CGCCCTCGCA GCCGCCCCAA TCGCCGTTAT TTCCCCCGCC CGGCACCGCC
CACCCGCATG GCCGCCCCGC CTGCGTGCTG TCGGTGGAGG ACGATCCGGT CATCCGCCAG
TCCATCGCCG GGTGGCTTTC CGATGAAGGC TACCTGGTCC TGGAGGCCGA GGACGGCATC
TCGGCGCTGC GCGCCGTGCG CGAACAACGC CCCGACGTGG TGCTGCTGGA CCTGGGCATT
CCCGGTATTT CCGGCGATGC CGTGCTGGAG CGCATGGCCC AGGAATCGCC CGAGGTGCCG
GTGGTGGTGG TTTCTGGCCG GGCGGAGATC GGCGATGCCA TCAACGCCTT CAAGCTGGGC
GCGTGGGACT ACATCACCAA GCCCATCCTG AACATGAACA TGCTGGCGCT CACGGTGCGC
AACTGCCTGG AGCGCCGCCG TCTGCGCGAG CGGCTGTCGG CCATGGAATC GCGCTATTCC
GGGCTGGTGC AGGGGTTGCC GGTGGTGGTC TTCAGCCTGG ACGACACGCT GGAGCTCACC
TTCATCAACG AGGCCTGCCG CACGGTGCTG GGCTGGACGC CGGAACAGGC CCTGCTGGAA
CCCGGCTGGT TCATGGACAA CGTGTTCCCC GAAGACCGCG AGCGGGTGCG CGGTGCATTT
TCCGGCGCGT TTTCCGCCAG CACCCCGTTT TCGCTGGAAT TCCGCATGAT CAACCCGCGC
GGGATACCCC TGTTCGTGCA GGCCCGTTCC ACCGCCGTGG CCTCGCCCGA CCTTGCGCGC
GGCATGCCGG GCCGCATCGA AGGGGTGCTG ATCGACCTTT CGCGCCGGGT GTTTCTGGAA
CGACTGCTGG TGCAGCGCGA AAAGCTGAAC ACCCTGGGCG CGCTGGTGGA CGAGATAGCC
CACGAATTCC GCAACCCGGT CTTCGCGCTG GCGGGCTTTG CCCGCACCCT GCACCGCAAG
TTTCCGGACG CCCAAGAGGC GGAAGTGGTG CTGGAAGAAG CCACCCGGCT GGAAGCCCTG
ATCAACCGGG TGCAGCAGTA CCTGGCCCCC GTGGACATCG TGCCCCGCCC GTGCAGCCTT
GCCGCCGTGC TGGACTTTGC GGCGGACTTG CTGCACGCCC CCTTGCAGCG CAAGGGGGTG
GAACTGCGGG TGGAGGCCCC CGCCAACCTG CCGCCCGTGC AGTCCGACCC GGACCTGCTG
GCCCAGATCG TGGTGGGCAT GGCGGGGCTG GCCGTGGAAC ACGGCGTGCC CGGCAGCGAA
GCCGTACTGC GCTGCCGGGA CGCGGGCCGT GGCCAGTTGG TGGAGGTGCT GCTGCGCACC
GAATCGCCCC TGGCCCACGA CACGGAACTT TCGCTGATGC CCTTCGGCGA CCAGCAGGGA
CCGCAGCCGC TGGCCGTCAG CTACAAGCTG GCCCGCGACC TGAGCTGCCT GCTGCACGTG
CGGCGCGAAC CGGACGGCCT GCTGCTGATG CTGGCCGTGC CCGTGGACCC CGACGACGTG
GCCAACCTGC TGGGCGAGGA ATAG
|
|---|
| Protein sequence | MCPPPSQPPQ SPLFPPPGTA HPHGRPACVL SVEDDPVIRQ SIAGWLSDEG YLVLEAEDGI
SALRAVREQR PDVVLLDLGI PGISGDAVLE RMAQESPEVP VVVVSGRAEI GDAINAFKLG
AWDYITKPIL NMNMLALTVR NCLERRRLRE RLSAMESRYS GLVQGLPVVV FSLDDTLELT
FINEACRTVL GWTPEQALLE PGWFMDNVFP EDRERVRGAF SGAFSASTPF SLEFRMINPR
GIPLFVQARS TAVASPDLAR GMPGRIEGVL IDLSRRVFLE RLLVQREKLN TLGALVDEIA
HEFRNPVFAL AGFARTLHRK FPDAQEAEVV LEEATRLEAL INRVQQYLAP VDIVPRPCSL
AAVLDFAADL LHAPLQRKGV ELRVEAPANL PPVQSDPDLL AQIVVGMAGL AVEHGVPGSE
AVLRCRDAGR GQLVEVLLRT ESPLAHDTEL SLMPFGDQQG PQPLAVSYKL ARDLSCLLHV
RREPDGLLLM LAVPVDPDDV ANLLGEE
|
|---|
| |