| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1929 |
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| Symbol | |
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| ID | 5110057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2121472 |
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| End bp | 2122656 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503164 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001187423 |
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| Protein GI | 146306958 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.310245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAAA CCAGTGCCAC TCTGCTGATC ATCGACGACG ACGATGTCGT GCGTGCCAGC
CTCGCAGCCT ATCTCGAGGA CAGCGGCTTC AAGGTATTGC AGGCCAACAA CGGTTTGCAG
GGGCTGGAAG TGTTCCAGCA GGAAAGCCCC GACCTGATGA TCTGTGACCT GCGCATGCCG
CAGGTCGATG GCCTCGAGCT GATCCGTCGT ATCAACGCCC TGGGTGTCGA AGTCCCGGTG
ATTGTGGTCT CGGGCGCAGG CGTCATGAAC GATGCCGTCG AAGCCCTGCG TCTGGGCGCT
GCCGATTACC TGATCAAGCC GCTGGAAGAC CTGGCGGTGC TCGAGCACTC GGTGCGTCGG
GCACTGGATC GCTCGCGCCT GCGCATGGAG AACCAGCGCT ACCGCGAGAA GCTCGAGGCT
GCCAACCGCG AGTTGCAGGC CAGCCTGCAC CTGCTGCAGG AAGACCAGAA CGCCGGTCGC
CAGGTGCAGA TGAACATGCT GCCGGTGACG CCCTGGCAGG TCGATGGCCT GACCTTCGCG
CACAAGATCA TCCCCTCCTT GTACCTGTCC GGTGATTTCG TCGACTACTT CCGCATCGAC
GAGCGACGCA TAGGCTTCTA CCTGGCGGAC GTTTCCGGGC ACGGCGCTTC TTCGGCCTTC
GTCACCGTGC TGCTCAAGTT CATGACCACG CGCCTGCTCT ACGAGTGGCG GCGGGGCGGT
TCGCTACCCG AGTTCAAGCC CTCCGATGTG CTCGGCCACA TCAATCGCGG GTTGATCAAC
TGCAAGCTCG GCAAGCATGT GACCATGCTG GGCGGGGTGA TCGACGAGCA GAGCGGCCAG
CTCACCTACA GCATCGGCGG CCATCTGCCG CTGCCGGTAC TGTTCGAGAA TGGCGAGGCG
CGGTATCTGG AAGGGCGCGG TCTGCCGGTC GGCCTGTTCG CAGAGGCCGA GTATGGCGAT
CAGGTCATGA AGCTGCCCGA ATCATTCAGC CTCACCTTGC TTTCCGATGG CATTCTCGAC
CTGCTGCCAG GCGAGACGTT GAAGGAGAAG GAATTGGCGT TGCCACAACT GGTTAGCCAG
GCTGGCGGTA CGCTGGACGG TTTGCGTCAA GTTCTCGGTC TGGCCAATCT CGGCGAGATG
CCGGATGATA TCGCCTTGCT GGTGTTGAGC AGGAACCTTG CATGA
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| Protein sequence | MHKTSATLLI IDDDDVVRAS LAAYLEDSGF KVLQANNGLQ GLEVFQQESP DLMICDLRMP
QVDGLELIRR INALGVEVPV IVVSGAGVMN DAVEALRLGA ADYLIKPLED LAVLEHSVRR
ALDRSRLRME NQRYREKLEA ANRELQASLH LLQEDQNAGR QVQMNMLPVT PWQVDGLTFA
HKIIPSLYLS GDFVDYFRID ERRIGFYLAD VSGHGASSAF VTVLLKFMTT RLLYEWRRGG
SLPEFKPSDV LGHINRGLIN CKLGKHVTML GGVIDEQSGQ LTYSIGGHLP LPVLFENGEA
RYLEGRGLPV GLFAEAEYGD QVMKLPESFS LTLLSDGILD LLPGETLKEK ELALPQLVSQ
AGGTLDGLRQ VLGLANLGEM PDDIALLVLS RNLA
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