| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2307 |
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| Symbol | |
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| ID | 4459398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2835547 |
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| End bp | 2837202 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703073 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_846424 |
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| Protein GI | 116749737 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAA AACCATCCTA TGAAGAGCTG AAACGGAAAG TGGACCTTCT CGATCGGGCT
GTTCGAGAGA ACGCGAGGGT GGAGGCGGAC CTCCGGGAGG AATTGGAGAA GCTCCGGGCA
CTGTACCAAG CGGCGGTCTC GCAGTCGGAC GACCTGCTTC GCGAGAGTGA GGAACGGTTC
CGATTCATGG TGGAAACCAC CGGGGATGTC ATCTACCGCC TGCATTATGA CACCATGCGC
TACGACTACC TGAGTCCCGG AATCCAGAAG CTCACCGGAT ATCCGCCGGA AGAAATCATG
GACTCCGGCT TTTCCCGGCT GGTGACCCGA ATCGATCTGC CCGGAAAGGA AGACGTCGAT
CCGGAAGTGC TGGTCAGAGA TCGGCACGAA GGGAAAACCG GGGAGTACAG GGGAGACTAC
CTGATCGTGA CCAGGACGGG AGAACGCAAG TGGTTGAGAG ACCATTCCTT TCCCTGGTAC
GATGAGTCCG GCAGACTCGT GGGTTCTGTC GGAATACTGA GCGACGTGAG CGAATACAGG
GAGGCCGAGG CGCTGGTGAG GCTGCGCACG GCCGACCTGG AGGAATCCGA AGAGAAATAC
CGGACGATCG TCGAGAACGT TCCGCTGGTC GTCTACCGCA TAAGGCCGAC GGGGGAATTG
CTGTTCATCA ATCAGTTCGT CGAGGAGATC ATCGGCTATG GCCCGGCCGA GATACTCCGG
GAGCCGGCTC TGTGGAGTAG AGCGATCTAC GATGAAGACC GCTCAAGGGT CGCGGACCTC
CGGAAGAAAG CGCTTCTCGA CGGCAGGGAG TTCATCGCCG AATACCGTGT CGTGCACAAG
AACGGCTCCA TCGTCCACGT GATGGACCAC GCCATCCCGA CCCGGACGCC CGATGGCCGG
GTGAACACGC TGGACGGCAT CATCATGGAT GTGACGGGGC GCGTGAAGCT CCAGGAACAA
CTCATTCGGA GCGAAGGAAT AAAGACGATC AGCGAGGTTT CCGCCAGACT GGCGCACGAA
ATCCGCAACC CCCTGGTTTC GGCGGGCGGG TTCGCGCGGC GCCTGCTTTC GTCCATGCCC
CCCAGCGACC CGAATCGGGA CAAGGTGGAG ATCATCGTCA AGGAAGTCAG CCGTCTCGAA
GGCATCCTGC GCATGATCCT CAATTACATC CAGCCCATCG AGCTCGAGCT GTCGCCGGTG
GACCCGAAAT CACTGGTGGA AACGGCATTG CGCGGAATCG AAACGGACCT GAGGGAAAAG
GCCGTTGCCA TCCGCGCCAC ATTGCTCCCT GGCCTGCCCC GTATCGCGGT CGACGAGCTC
CAGATGAAGC AGGTCTTGAA GAGCCTGTTG AAAAAGGCGC TGAGTCAAAT GGTTCCCGGC
GACACGCTGA CCATCTCCTC CGCCCTGGAG GAGGACGTGA TCGAGCTGTT GGTGCGTTAT
CCGGTCCGGA ACCTGTCACC CGAGGACGTG GACCACTTCT TCTATCCCTT CACGACATCG
AAGATGGACT ACCCGGCGGC CGATCTCCCC ATGTCGAAAA TCATCGTGCA CAAGCACGGA
GGGGAGATCG AGGTTTCGCA GGAATCGCCC GGCCTTATCG CCATCCGGAT CTCCCTGCCC
GTCCGGTGGC GCCCCTTCCG GATGGAGGGA CACTGA
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| Protein sequence | MPKKPSYEEL KRKVDLLDRA VRENARVEAD LREELEKLRA LYQAAVSQSD DLLRESEERF
RFMVETTGDV IYRLHYDTMR YDYLSPGIQK LTGYPPEEIM DSGFSRLVTR IDLPGKEDVD
PEVLVRDRHE GKTGEYRGDY LIVTRTGERK WLRDHSFPWY DESGRLVGSV GILSDVSEYR
EAEALVRLRT ADLEESEEKY RTIVENVPLV VYRIRPTGEL LFINQFVEEI IGYGPAEILR
EPALWSRAIY DEDRSRVADL RKKALLDGRE FIAEYRVVHK NGSIVHVMDH AIPTRTPDGR
VNTLDGIIMD VTGRVKLQEQ LIRSEGIKTI SEVSARLAHE IRNPLVSAGG FARRLLSSMP
PSDPNRDKVE IIVKEVSRLE GILRMILNYI QPIELELSPV DPKSLVETAL RGIETDLREK
AVAIRATLLP GLPRIAVDEL QMKQVLKSLL KKALSQMVPG DTLTISSALE EDVIELLVRY
PVRNLSPEDV DHFFYPFTTS KMDYPAADLP MSKIIVHKHG GEIEVSQESP GLIAIRISLP
VRWRPFRMEG H
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