Gene BMASAVP1_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_0472 
Symbol 
ID4677045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008784 
Strand
Start bp484106 
End bp485584 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content67% 
IMG OID639842999 
Productsensory box histidine kinase/response regulator 
Protein accessionYP_990082 
Protein GI121596465 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.798891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGC CGTCGAAAAA CGTCGAGATC CTGCTGGTCG AGGACAGCGT GACCGATGCA 
CTGCTCATCG GCGAGGCGCT GATCGACGTG ACGGAGTTCG CGCCGCACGT GGTCAACGCC
GAGCTGCTGT CGGCGGCGCT CGAATGCACG AAACGCGCGC ACTTCGATGT GGTGCTGCTC
GATCTCGGCT TGCCCGACGC GCACGGGCTC GATACGTTCC GCCAGTTTCA TCGGCAGGTG
CCCGACGTTC CGGTGCTCGT GCTGACGGGG CTCGACGACC TGTCCGTCGG GCTGCAGGCG
ATTCAGGAGG GCGCGCAGGA CTATCTGCTG AAAAAGCGCG TCGAGACGCC GTTGCTGAGC
CGGGCGATAC GTTATGCGAT GGAGCGGCAC CGCGTCGCCG CGGCGCTCGC GGCGAGCGAG
GAGCGCTTCC AGCTCGCGGT CAGCGGCGCG AGCGCGGGGC TGTGGGACTG GAATCCGAAG
ACGGGCGCGA TGTACCTGTC GCCGCACTTC AAGAAGATCA TGGGCTACGA GGACCATGAG
CTGCCCGACG AGATCACCGG GCATCGGGAA TCGATTCATC CGGACGACCT GAAGCGCGTG
CTCGACGCGC TGAAGGCGCA CCTCGAGCAT CGCGACACGT ACGACGTCGA ATACCGGGTG
CGCACGCGCT CGGGCGATTA CCGCTGGATC CAGTCGCGCG GCCAGGCGCT GTGGAACAGC
GCGGGCGAGC CGTACCGGAT GGTCGGCTGG ATCATGGACG TCACCGATCG CAAGCGCGAC
GAGGACGCGC TGCGGGTGTC GCGCGAGGAG CTGCGCCGCC TGTCCGCGCA CATCCAGAGC
ATTCGGGAAG AAGAGAAAAC GCGCATCGCG CGGGAATTGC ACGACGATCT CGGCCAGCAA
CTGACGGCGC TGAAGATGGC CGTCACGCTC GTCGACAACG AACTGAAGGA CGCGGGCTGG
GCCTCGCGCA CGAGCCGTTT GCCGAACGTC TATGCGTTGA TCGGCCAGTT GCTGGACTCG
GTGCGGCGGA TTGCGGCGGA CCTGCGCCCC GTGATGCTCG ACGATCTCGG GCTGATGGCG
GCGATCGAAT GGCTGACGCA CGAGTTCGTC GAGCGATACC GGATTCCGGT GACGAGCCGC
ATCGAAGCCG ACGACATCGC GTTCACCCGC GGCAGCGCGA CCGAAGTGTT CCGCATCGTG
CAGGAGGCGC TGACCAATGT CGCGCGGCAT TCGGAGGCGA CCGAAGTCAC GCTCGACATC
ATTCGCGACG AGCCGAACTG CATCGTGCGG ATCGCCGATA ACGGTTGCGG CACCGCGCGC
GATACGCGTC CGAACCGGCA CTCGCTCGGC CTGCTCGGCA TGCGCGAGCG CGCGGCGCGC
CTCGGCGGCG AGATCCGGAT CGACACCGCG CCCGGCCGGG GCTTCGCGTT GACGGCGACG
CTGCCGCTTG CCGTGATCGA GGCGGCCGAT TCGGCCTGA
 
Protein sequence
MSSPSKNVEI LLVEDSVTDA LLIGEALIDV TEFAPHVVNA ELLSAALECT KRAHFDVVLL 
DLGLPDAHGL DTFRQFHRQV PDVPVLVLTG LDDLSVGLQA IQEGAQDYLL KKRVETPLLS
RAIRYAMERH RVAAALAASE ERFQLAVSGA SAGLWDWNPK TGAMYLSPHF KKIMGYEDHE
LPDEITGHRE SIHPDDLKRV LDALKAHLEH RDTYDVEYRV RTRSGDYRWI QSRGQALWNS
AGEPYRMVGW IMDVTDRKRD EDALRVSREE LRRLSAHIQS IREEEKTRIA RELHDDLGQQ
LTALKMAVTL VDNELKDAGW ASRTSRLPNV YALIGQLLDS VRRIAADLRP VMLDDLGLMA
AIEWLTHEFV ERYRIPVTSR IEADDIAFTR GSATEVFRIV QEALTNVARH SEATEVTLDI
IRDEPNCIVR IADNGCGTAR DTRPNRHSLG LLGMRERAAR LGGEIRIDTA PGRGFALTAT
LPLAVIEAAD SA