Gene SO_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3196 
Symbol 
ID1170890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3337530 
End bp3338633 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content44% 
IMG OID637345013 
Productresponse regulator 
Protein accessionNP_718751 
Protein GI24374708 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAA ATGATGTTTC AATTCTGTGG GTTGAAGACG ACCCGGTATT TAGGCAAATT 
GTTGCCACCT TTCTAAGCGG CCGCGGCGCA CAAGTAGTGC AGGCTGGTGA TGGTGAGCAG 
GGCCTTATTC ATTTCAAGCA GCAACGTTTT GACATTATTC TTGCTGATTT GAGCATGCCA 
AAGCTGGGTG GCTTAGATAT GCTTAAGGAA ATGAGCAAGT TAGAGCCGCT AGTGCCTTCA 
ATTGTTATCT CGGGTAACAA TGTCATGGCC GATGTTGTTG AGGCTTTGCG TATTGGCGCC 
TGTGATTATT TAGTCAAACC CGTCGCCGAT CTTTTTATTA TCGAGCAAGC TATTCAACAA 
GGGTTGCAAC GACATCAGCT TGATGATATT TCGCAGACCG ACCTTGATGT CTTATCTCAT 
CAGGAACTGA GCGATAACTT AACCATATTA GAACAGAGCG TTGAAGCTGC GAAGCAAGTT 
CAGCAGCAAC TTTTCCCTGC TTCAAATATC AGTTATCCCG CCGCAAAAGT CGATTACAGC 
TTGTTTAAAA GTAGTGATAT CAGTAGCTAT TTTATTGATT CAACGATGGT GGGGAGTGAT 
TACTTAATCA TGTATATGGC CCACCTCTAT CCCGAGGATA ACCGCGCAGC GTTTGCCTGT 
GTATTGCTAC GCAGTTTTGT GAATCAAAAA CTTAAGAGTT ACCGTAGTGG CCAGAGTAAA 
ACCATTATCG AACCATTCAA TATGCTGAGT TACTTGAATG AACGTTTAGT GAAGTCTGGT 
CTAGATATCA CAGTGGATAT TGTTTATGTC GCGATTGAGT TAACGCGTTA TCGCGCTGCG 
ATTGCCCAAG CAGGGAAGGG GCTTAGATGT TACTTACGTA ATGATGAAGG CCTGAGCCCA 
TTAGCACTGT CGGATAGTTT GCAGCTAGGT CTATTGGACT GGGGCAAACC GAGTGTTCAG 
TTTCGCACTA TCTTGCCACA GGAACAGCTT TGCATTGCCA CCAATGAGCC GGAACATAAG 
CAGCTGTTAT TGGATAATCA ATTTAAAGGA TTAGCTTATA ACCCGCATTT ACCTGCAGGT 
GGTTTTATAC AATTGAGTTT ATAA
 
Protein sequence
MALNDVSILW VEDDPVFRQI VATFLSGRGA QVVQAGDGEQ GLIHFKQQRF DIILADLSMP 
KLGGLDMLKE MSKLEPLVPS IVISGNNVMA DVVEALRIGA CDYLVKPVAD LFIIEQAIQQ 
GLQRHQLDDI SQTDLDVLSH QELSDNLTIL EQSVEAAKQV QQQLFPASNI SYPAAKVDYS 
LFKSSDISSY FIDSTMVGSD YLIMYMAHLY PEDNRAAFAC VLLRSFVNQK LKSYRSGQSK 
TIIEPFNMLS YLNERLVKSG LDITVDIVYV AIELTRYRAA IAQAGKGLRC YLRNDEGLSP 
LALSDSLQLG LLDWGKPSVQ FRTILPQEQL CIATNEPEHK QLLLDNQFKG LAYNPHLPAG 
GFIQLSL