Gene Gbem_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3286 
Symbol 
ID6780144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3779157 
End bp3780533 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID642769279 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002140079 
Protein GI197119652 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGA CCATTCTGAT TGTTGACGAC GAGGAGGGAA TCCGATCCTC CCTGGCTGGC 
ATCCTCGAAG ACGAGGGGTA CCGGACCGTC TGCGCCGCCG ACGGCGTCGA GGCGCTCGCC
CTTTGCGCCC GGGAGCTACC GGGGCTCGTG CTCTTGGACA TCTGGATGCC CAAGATGGAC
GGCATCGAGA CGCTGCAGCG CCTGAAGGAA TCGCACCCCT TCCTGAACGT CATCATGATG
AGCGGCCACG GCACCATCGA GACGGCGGTG AAATCGACCA AGCTCGGCGC CTATGACTTC
ATCGAGAAGC CGCTTTCGCT GGAGAAGGTG GTGGTCACGG TGGAAAACGC CCTGGCCATG
AACCGCCTGA AGGAGGAGAA CGCCGCCCTG CGCGACCAGG TGCAGCAAGG GCACGAGATG
ATCGGTAATT CCGCCGCCAT GCTGCAGTTG GGCGAGCAGA TCCGGCTCGT CGCCCCGACC
AACGCCTCGG TGCTGATCAC CGGCGAGAAC GGCACCGGAA AGGAACTCGT AGCCCGCTCG
GTCCATTTCC ACAGCCAGCG CCGCGACAAG CCCTTCATCG AGATCAACTG CGCCGCCATC
CCCGAGGAAC TGATCGAGAG CGAACTCTTC GGCCATGAGC GGGGTGCTTT CACCGGAGCT
GTCGCGCAGA AGAAGGGGAA ATTCGACCTG GCCGATGGCG GCACGCTCTT TCTGGACGAG
ATCGGCGACA TGTCCTTGAA GACGCAGGCC AAGGTGCTGC GGATACTGCA GGAGAAGAAG
TTCGAGCGGG TGGGTGGAAC CCGGACCCTG GAGGTGGATG TCCGCATCGT CGCCGCCACC
AACAAGCTCC TCGAGGAGGA GATCAGAAAC GGCGGCTTCC GCGAAGACCT CTACTACCGG
CTGAACGTGG TCCCCTTCAA GGTCCTGCCG TTGAGGGAGC GGCGCGACGA TATACCGCTT
CTGGCCCGGT ACTTCATGGA TGCCTTCTGT TCTCGCGAGG GGAGGGAGTC GAAGCGGATC
GTCCCCGAGG CCATGGAGGC GCTCAAGCGC TACGAGTGGC CGGGGAACGT GCGCGAGCTG
AAGAACATCG TGGAGCGGCT GGTAATCATG ACCCCCAGCG GGACGGTGAC CGTCGACCAC
CTCCCCGATT ACTTCCGCGG CGATGGTGCC GGCAAGGATG CGGGGGGGGG CAAGCTCGAC
AGCGTCTTGG AACTCTCCAG CCTGCGCGAG GCGCGAGAGG AGTTCGAGAG GGAGTTCATC
ATCCAGAAGC TGGAGGAGAA CGACTGGAAC GTCTCCAAGA CCGCCGAGGC CATCGAGCTT
GAACGGAGCA ACCTGCACCG CAAGATCAAG AGTTACGGCA TAGACATGAA GAAATAG
 
Protein sequence
MTETILIVDD EEGIRSSLAG ILEDEGYRTV CAADGVEALA LCARELPGLV LLDIWMPKMD 
GIETLQRLKE SHPFLNVIMM SGHGTIETAV KSTKLGAYDF IEKPLSLEKV VVTVENALAM
NRLKEENAAL RDQVQQGHEM IGNSAAMLQL GEQIRLVAPT NASVLITGEN GTGKELVARS
VHFHSQRRDK PFIEINCAAI PEELIESELF GHERGAFTGA VAQKKGKFDL ADGGTLFLDE
IGDMSLKTQA KVLRILQEKK FERVGGTRTL EVDVRIVAAT NKLLEEEIRN GGFREDLYYR
LNVVPFKVLP LRERRDDIPL LARYFMDAFC SREGRESKRI VPEAMEALKR YEWPGNVREL
KNIVERLVIM TPSGTVTVDH LPDYFRGDGA GKDAGGGKLD SVLELSSLRE AREEFEREFI
IQKLEENDWN VSKTAEAIEL ERSNLHRKIK SYGIDMKK