Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1648 |
Symbol | |
ID | 6115889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2039684 |
End bp | 2040787 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633131 |
Product | response regulator receiver protein |
Protein accession | YP_001760029 |
Protein GI | 170726003 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0057956 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTAA AAGAGCTTGT TGTTTTACTT GTTGAAGATG ATCCTGTTTT TCGTCGAATT GTGGCTTCTT TTCTGGATAG CCGCGGTGCA ACAGTGCTTG AAGCTGATGA TGGTGAACAA GGTTTAGATA GATTTAAGCA GTATGCTGTT GATATCGTAT TAGCAGATCT AAGCATGCCT ATCATGGGCG GCTTAGTCAT GTTAAAGAAG ATGTCAGAGA TTAACCCAAG CGTCCCCTCA ATTGTTATTT CTGGTAATCA AGTGATGGCA GATGTCGTTG AAGCGCTTAG GATAGGCGCT AGCGACTACT TAGTAAAACC TGTTGCAGAT CTCTTTCTTA TCGAAAGCGC TATTAAGCAA TGCCTTGATG AGCGGCATAT GAAAGATGTG CAGCTTGAAG ATATGGAAGA GCTTTCTTAC CAAGAGTTGC AAGACAATTT AGTGCTTTTA GAGCAAAATG CAGAAGCTGC AAAAAGTGTC CAGCAGCAGC TATTTCCACC ATCCCAAATT AACTACCCTT GCGCTAAAAT TGATTACAGC TTATTTAAAA GCGATGAAGT GAGTGCATAC TTCATTGATA CCGTTAATGT GGGTGAGCGG CATCTTGTTA TGTATATGGC GCACTTCACT CCTCAGGATA ATCGAGCTGC ATTTGGTAGC GTTCTTTTAA AGAGCTTTGT AAATCAAAAG CTGAAGCTTT TTCGTGACGG TTCAACACAA GCTATTATCG AGCCATACAA CATGCTTTGT TATCTAAATG AAAGAATGAC TAAGTCTGGC TTAGATATCT TTATCGATAT CGTTTATGTG GTTGTAGAGC TAACTCAATT TCGCGCTTCA ATCGCCCAAG CTGGGCATGG TTTACGCTGT TACCTTCGTA ATAGTGAAGG GCTGATGCCG CTAGCGTTAC CTGACTCTCT CCAGTTAGGT ATTTTAGACT GGGGTCAACC TAGTTCACAC TTTAGAACTC TAATGCCAGG AGAGAGCTTT TGTATCTCAT CCAGTGCCCC AGAGCATAAA CAGATGTTAC TTAAAGATCA CTTTTGTGGT TTGACCTATG ATACACAAAC GCCAAACGGT GGTTACGTAC AACTCACTTT TTAA
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Protein sequence | MALKELVVLL VEDDPVFRRI VASFLDSRGA TVLEADDGEQ GLDRFKQYAV DIVLADLSMP IMGGLVMLKK MSEINPSVPS IVISGNQVMA DVVEALRIGA SDYLVKPVAD LFLIESAIKQ CLDERHMKDV QLEDMEELSY QELQDNLVLL EQNAEAAKSV QQQLFPPSQI NYPCAKIDYS LFKSDEVSAY FIDTVNVGER HLVMYMAHFT PQDNRAAFGS VLLKSFVNQK LKLFRDGSTQ AIIEPYNMLC YLNERMTKSG LDIFIDIVYV VVELTQFRAS IAQAGHGLRC YLRNSEGLMP LALPDSLQLG ILDWGQPSSH FRTLMPGESF CISSSAPEHK QMLLKDHFCG LTYDTQTPNG GYVQLTF
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