More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_0497 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_0497  response regulator receiver and SARP domain protein  100 
 
 
363 aa  744    Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000475999  n/a   
 
 
-
 
NC_011830  Dhaf_4304  response regulator receiver and SARP domain protein  33.43 
 
 
349 aa  177  2e-43  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0410  response regulator receiver and SARP domain protein  31.93 
 
 
376 aa  164  2.0000000000000002e-39  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000633698  n/a   
 
 
-
 
NC_011830  Dhaf_0495  response regulator receiver and SARP domain protein  29.62 
 
 
365 aa  149  5e-35  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000108458  n/a   
 
 
-
 
NC_011830  Dhaf_1614  response regulator receiver and SARP domain protein  30.56 
 
 
376 aa  149  6e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.401218  n/a   
 
 
-
 
NC_011830  Dhaf_1568  response regulator receiver and SARP domain protein  31.95 
 
 
288 aa  134  3e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0553389  n/a   
 
 
-
 
NC_013165  Shel_12060  two component response regulator  29 
 
 
256 aa  95.1  2e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.106419  normal 
 
 
-
 
NC_009456  VC0395_0387  response regulator  40.68 
 
 
261 aa  91.7  2e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07024  transcriptional regulator  35.94 
 
 
263 aa  85.9  0.000000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007912  Sde_3668  two-component response regulator AlgR  31.31 
 
 
243 aa  85.9  0.000000000000001  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00827536  normal  0.334671 
 
 
-
 
NC_009078  BURPS1106A_A1373  DNA-binding response regulator  39.5 
 
 
300 aa  85.5  0.000000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.648551  n/a   
 
 
-
 
NC_013457  VEA_000974  response regulator of the LytR/AlgR family  35.94 
 
 
263 aa  85.1  0.000000000000002  Vibrio sp. Ex25  Bacteria  normal  0.728867  n/a   
 
 
-
 
NC_013173  Dbac_2397  two component transcriptional regulator, LytTR family  37.61 
 
 
261 aa  84.7  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1083  putative two-component response-regulatory protein YehT  35.15 
 
 
239 aa  84.7  0.000000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.450563  normal 
 
 
-
 
NC_009616  Tmel_0114  LytTR family two component transcriptional regulator  37.5 
 
 
226 aa  84.7  0.000000000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.310837  n/a   
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  30.29 
 
 
252 aa  84.7  0.000000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2443  LytTR family two component transcriptional regulator  40.87 
 
 
279 aa  84.3  0.000000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2575  two-component response regulator  42.99 
 
 
241 aa  84  0.000000000000004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3408  LytTr DNA-binding region  38.84 
 
 
240 aa  83.6  0.000000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.111489  normal 
 
 
-
 
NC_007644  Moth_1964  LytR/AlgR family transcriptional regulator  38.26 
 
 
255 aa  83.6  0.000000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.777054 
 
 
-
 
NC_010717  PXO_03033  transcriptional regulator protein  39.13 
 
 
165 aa  83.2  0.000000000000006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  33.12 
 
 
260 aa  82.8  0.000000000000009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal 
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  38.98 
 
 
241 aa  82  0.00000000000001  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  40.52 
 
 
239 aa  82.4  0.00000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  40.52 
 
 
239 aa  82.4  0.00000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal 
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  40.52 
 
 
239 aa  82.4  0.00000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  40.52 
 
 
239 aa  82.4  0.00000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  35 
 
 
248 aa  82  0.00000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  40.52 
 
 
239 aa  82.4  0.00000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3519  hypothetical protein  36.72 
 
 
239 aa  82.4  0.00000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  35 
 
 
248 aa  82  0.00000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal 
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  34.21 
 
 
243 aa  82  0.00000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0898  two component transcriptional regulator, LytTR family  37.93 
 
 
265 aa  81.6  0.00000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1400  response regulator  34.75 
 
 
243 aa  81.3  0.00000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2452  putative two-component response-regulatory protein YehT  36.3 
 
 
238 aa  81.3  0.00000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.0310324  n/a   
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  40.68 
 
 
238 aa  81.6  0.00000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  40.68 
 
 
238 aa  81.6  0.00000000000002  Yersinia pestis Angola  Bacteria  normal  normal  0.159726 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  40.68 
 
 
238 aa  81.6  0.00000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0119  response regulator receiver protein  38.02 
 
 
249 aa  81.3  0.00000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0579  response regulator receiver protein  31.03 
 
 
239 aa  81.3  0.00000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  38.98 
 
 
241 aa  80.5  0.00000000000004  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_010814  Glov_3544  two component transcriptional regulator, LytTR family  34.48 
 
 
251 aa  80.5  0.00000000000004  Geobacter lovleyi SZ  Bacteria  normal  0.0394969  n/a   
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  38.21 
 
 
239 aa  80.5  0.00000000000004  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2697  LytR/AlgR family transcriptional regulator  27.86 
 
 
240 aa  80.1  0.00000000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3416  putative two-component response-regulatory protein YehT  29.65 
 
 
237 aa  80.1  0.00000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.329348  normal  0.0577965 
 
 
-
 
NC_013132  Cpin_6623  two component transcriptional regulator, LytTR family  39.82 
 
 
258 aa  80.1  0.00000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0991065  normal  0.080317 
 
 
-
 
NC_009075  BURPS668_A1458  DNA-binding response regulator  36.97 
 
 
140 aa  80.1  0.00000000000006  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  36.67 
 
 
266 aa  79.7  0.00000000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2603  response regulator  36.97 
 
 
243 aa  79.3  0.00000000000009  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1227  two component transcriptional regulator, LytTR family  46.05 
 
 
277 aa  79  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  0.299238  normal  0.813842 
 
 
-
 
NC_007298  Daro_2093  putative two-component response-regulatory protein YehT  37.07 
 
 
237 aa  79  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4382  LytTR family two component transcriptional regulator  39.29 
 
 
273 aa  79.3  0.0000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  36.44 
 
 
237 aa  79.3  0.0000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0059  two component transcriptional regulator, LytTR family  37.82 
 
 
243 aa  79  0.0000000000001  Shewanella baltica OS223  Bacteria  normal  0.182784  normal 
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  35.65 
 
 
243 aa  79.3  0.0000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.000000000586434 
 
 
-
 
NC_013204  Elen_0137  two component transcriptional regulator, LytTR family  36.21 
 
 
237 aa  77.8  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_004414  response regulator of the LytR/AlgR family  35.54 
 
 
242 aa  78.2  0.0000000000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  36.59 
 
 
252 aa  78.2  0.0000000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_011071  Smal_0421  two component transcriptional regulator, LytTR family  46.34 
 
 
256 aa  78.2  0.0000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.268274 
 
 
-
 
NC_007973  Rmet_1381  LytR/AlgR family transcriptional regulator  43.18 
 
 
273 aa  78.6  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.557466 
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  37.17 
 
 
253 aa  78.2  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal 
 
 
-
 
NC_013037  Dfer_3280  two component transcriptional regulator, LytTR family  37.12 
 
 
245 aa  78.2  0.0000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2883  putative two-component response-regulatory protein YehT  32.89 
 
 
236 aa  77.8  0.0000000000002  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000903631  unclonable  0.0000000000401288 
 
 
-
 
NC_010718  Nther_1569  two component transcriptional regulator, LytTR family  33.33 
 
 
240 aa  78.6  0.0000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00000000000000531282 
 
 
-
 
NC_010506  Swoo_4846  LytTR family two component transcriptional regulator  36.21 
 
 
246 aa  78.6  0.0000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.568582  normal 
 
 
-
 
NC_010513  Xfasm12_1259  response regulator receiver protein  51.39 
 
 
252 aa  78.6  0.0000000000002  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00984  putative two-component response-regulatory protein YehT  33.33 
 
 
242 aa  78.2  0.0000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  34.17 
 
 
248 aa  78.6  0.0000000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3718  response regulator  40.68 
 
 
275 aa  77.4  0.0000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3531  two component transcriptional regulator, LytTR family  38 
 
 
243 aa  77.4  0.0000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0469  response regulator receiver protein  38.26 
 
 
254 aa  77.4  0.0000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0480  response regulator receiver domain-containing protein  37.72 
 
 
265 aa  77.4  0.0000000000003  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0420  LytR/AlgR family transcriptional regulator  39.29 
 
 
317 aa  77.4  0.0000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0328897  normal  0.0302219 
 
 
-
 
NC_013203  Apar_1323  two component transcriptional regulator, LytTR family  51.47 
 
 
237 aa  77.4  0.0000000000003  Atopobium parvulum DSM 20469  Bacteria  normal  0.0540721  normal  0.0273831 
 
 
-
 
NC_010577  XfasM23_1226  LytTR family two component transcriptional regulator  51.39 
 
 
252 aa  77.4  0.0000000000003  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4408  two component transcriptional regulator, LytTR family  38.05 
 
 
268 aa  77  0.0000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1047  LytTr DNA-binding region  36.13 
 
 
241 aa  77.4  0.0000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.791092  normal 
 
 
-
 
NC_010730  SYO3AOP1_0715  two component transcriptional regulator, LytTR family  37.1 
 
 
245 aa  77  0.0000000000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00500528  n/a   
 
 
-
 
NC_013037  Dfer_5300  two component transcriptional regulator, LytTR family  34.35 
 
 
241 aa  77.4  0.0000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0290142 
 
 
-
 
NC_009997  Sbal195_0060  LytTR family two component transcriptional regulator  37.93 
 
 
243 aa  77  0.0000000000004  Shewanella baltica OS195  Bacteria  normal  0.0478076  hitchhiker  0.000497336 
 
 
-
 
NC_008321  Shewmr4_0057  response regulator receiver protein  36.97 
 
 
243 aa  77  0.0000000000004  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000048418  decreased coverage  0.0000000648872 
 
 
-
 
NC_008322  Shewmr7_0055  response regulator receiver protein  36.97 
 
 
243 aa  77  0.0000000000004  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000989316  hitchhiker  0.000468323 
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  37.93 
 
 
239 aa  77.4  0.0000000000004  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0055  LytTR family two component transcriptional regulator  37.93 
 
 
243 aa  77.4  0.0000000000004  Shewanella baltica OS185  Bacteria  normal  0.868518  n/a   
 
 
-
 
NC_009052  Sbal_4299  LytTR family two component transcriptional regulator  37.93 
 
 
243 aa  77  0.0000000000004  Shewanella baltica OS155  Bacteria  decreased coverage  0.000001386  n/a   
 
 
-
 
NC_012917  PC1_3149  putative two-component response-regulatory protein YehT  37.1 
 
 
238 aa  77  0.0000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0190  LytR/AlgR family transcriptional regulator  32.43 
 
 
244 aa  76.6  0.0000000000005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.625509  n/a   
 
 
-
 
NC_008784  BMASAVP1_0193  response regulator  45.68 
 
 
108 aa  76.6  0.0000000000005  Burkholderia mallei SAVP1  Bacteria  normal  0.673566  n/a   
 
 
-
 
NC_008835  BMA10229_0469  alginate biosynthesis regulatory protein  45.68 
 
 
108 aa  76.6  0.0000000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.901816  n/a   
 
 
-
 
NC_013170  Ccur_01160  response regulator of the LytR/AlgR family  37.17 
 
 
238 aa  76.6  0.0000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  34.13 
 
 
260 aa  76.6  0.0000000000007  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_008228  Patl_1151  response regulator receiver protein  29.93 
 
 
276 aa  76.3  0.0000000000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3159  response regulator receiver  41.76 
 
 
242 aa  76.3  0.0000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1658  putative two-component response-regulatory protein YehT  37.29 
 
 
236 aa  75.5  0.000000000001  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000153786  n/a   
 
 
-
 
NC_013216  Dtox_0388  two component transcriptional regulator, LytTR family  33.61 
 
 
233 aa  75.5  0.000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0036  LytR/AlgR family transcriptional regulator  35.65 
 
 
248 aa  75.5  0.000000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  38.14 
 
 
238 aa  75.9  0.000000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0254  response regulator  33.58 
 
 
251 aa  75.5  0.000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.437869  normal 
 
 
-
 
NC_011899  Hore_10420  two component transcriptional regulator, LytTR family  47.06 
 
 
253 aa  75.9  0.000000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000460621  n/a   
 
 
-
 
NC_009997  Sbal195_1695  putative two-component response-regulatory protein YehT  37.29 
 
 
236 aa  75.5  0.000000000001  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal 
 
 
-
 
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