| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0715 |
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| Symbol | |
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| ID | 6332447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 738139 |
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| End bp | 738876 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657003 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_001930905 |
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| Protein GI | 188996654 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00500528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTT TTATCGTGGA AGATGAACCA ATCGCAAGAG AAAGATTGAT TAGACTTTTA
AAAGAGATTG GAAACGTCAA TATTGTTGGA GTTGCTGACA GTAAGGAAAA AGCTCTATCG
GAGATGAAAG ATAAAGAGAT TGATGTGTTA TTTTTAGATA TTAAGCTTCC AGACGGCACA
GGTTTAGAAA TTGCAAAAGA AGTCATTGAG GGTATGGATA ATCCGCCTTA CATAATCTTT
GCAACGGCAA ACGGAGACTT TGCACTTGAT GCCTTCAAAG CAAATGCAAT AGATTATCTA
TTAAAGCCAT TTACAAAGGA AGATGTAGAA AAAGCATTAG AGAAAATAAA AAACATAGAA
AACAAAAGCT TTAACCTTGC AAAGATAGCA ACCATTACTA CAAACACAGA AATACTCATA
CCAGTAAAAC ATCTTAGTAA GATAGTTCTT TTAAAGCCAG ATGATATTTA TTACATAAAG
GCTGAACTTT CTGAAACAGT CATAAGAACA AAGGATAAAG AGTACATTTC CAACAGAAAG
CTGTATGAGT TTGAAGATAT TTTAAAATAC ATAGGTTTTT TTAGAGTTCA CAAAAGCTAC
TTAGTAAATC TTACAAAAAT TAAAGAGATG AAGTCAGTAG AACAAAGTAA ATTTTTAATC
ACATTCCAAG ATATACCAGA CACTTTAAAA ACAAGCAGAG ATGGTGCAAA ATATCTAAGA
GATTATCTAA ACATTTAA
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| Protein sequence | MNVFIVEDEP IARERLIRLL KEIGNVNIVG VADSKEKALS EMKDKEIDVL FLDIKLPDGT
GLEIAKEVIE GMDNPPYIIF ATANGDFALD AFKANAIDYL LKPFTKEDVE KALEKIKNIE
NKSFNLAKIA TITTNTEILI PVKHLSKIVL LKPDDIYYIK AELSETVIRT KDKEYISNRK
LYEFEDILKY IGFFRVHKSY LVNLTKIKEM KSVEQSKFLI TFQDIPDTLK TSRDGAKYLR
DYLNI
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