| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3159 |
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| Symbol | |
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| ID | 8254277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3762439 |
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| End bp | 3763167 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936811 |
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| Product | response regulator receiver |
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| Protein accession | YP_003093416 |
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| Protein GI | 255533044 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAGGA AATCTGTTTT GGTGATAGAT GATGAAGATC ACGGCAGAGT ATTAGTTAAA
CAGTATTTAG AACCATATGC TGATTTTTTT GTTGCCGGCG AATGTTCTAA TGGTATCGAA
GCGGTTAAGT TTATCAATAT GCTGGAACCG GACCTGATAT TTCTCGACAT CCAAATGCCC
GGGGCCAACG GCTTCGAAGT TTTGCAAAGA ATTGATCACG TGCCCGACGT GATATTTACT
ACCGCATTTG ACAAATATGC GATCAGGGCT TTTGAAATCA ACGTGATCGA TTACCTGCTG
AAACCCTATA CAAAGGAGCG TTTTGATCAG ACCATGGCTC GCCTGAAGAG CAAACCCGCC
GCTCTTCCCC AACTCGCCAT GGGCACATTT TCCAGTCCGC ATAGCTATCC TGAACGGATC
ATGGTAGAGC ATCAAAAACG CTTTAAAAAC ATTTCTGTTC ATGATATCAT GTACCTTAAA
GCCGATGGCG ATTACACCAG GATATATACT GAAGAAACGT CTTTTTTAAG TTCGTTTGGA
ATAAGTGTGA TTGCTCAAAA ATTTGATCCG GCTAAATTTG TAAGAATTCA CCGATCTGTT
ATTATCAATT TAGACTATGT ACAGGAGTTG TACCGGGATA TTGGAAAAAC CTACTTAGTA
TTAGATAATG GGCTCGAATT TAATATAGGC AGGAGCTACC TCCCTGTTAT TAAGAGTTTT
ATTGTTTAA
|
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| Protein sequence | MSRKSVLVID DEDHGRVLVK QYLEPYADFF VAGECSNGIE AVKFINMLEP DLIFLDIQMP
GANGFEVLQR IDHVPDVIFT TAFDKYAIRA FEINVIDYLL KPYTKERFDQ TMARLKSKPA
ALPQLAMGTF SSPHSYPERI MVEHQKRFKN ISVHDIMYLK ADGDYTRIYT EETSFLSSFG
ISVIAQKFDP AKFVRIHRSV IINLDYVQEL YRDIGKTYLV LDNGLEFNIG RSYLPVIKSF
IV
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