Gene Dbac_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2397 
Symbol 
ID8378074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2752107 
End bp2752892 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID645001618 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_003158892 
Protein GI256830164 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCC CTGTCCGCTG CCTGCTGGTC GATGACGAGC TACCCGCCCT GGACGAACTG 
TCCTATCTGC TGTCCGAGTT TGAGGACGTG CGGATCGTCG GCACGGCCAT GTCCGCATCC
CAGGCCATGG AAGAAATCGT GCGCTTGCGC CCGGAAGTCG TTTTCCAGGA CATCCAGATG
CCCGGCGCGA CCGGCTTCCA TGTTCTGGAG CGGGCCCTCA AATGTCCAGA CCCGCCACTC
TTCGTCTTTG CCACCGCCTA TGACCAGTAC GCCATCCGCG CCTTCGAGGA GAATGCGGTG
GACTATCTGC TCAAGCCCGT CTCCCGCGAG CGTCTGGCCA AATGTCTGGG GCGCCTGCGC
AGCCTGCTGC GTCAGAACGA GGCGGGCCTC GCAGTGCAGC CGAAGCTGGA GGAGCTGCTT
AAGGGCATGG GACTCGGTCA GCCGCTGGTG CGCATCTCCG TGGAGCACCG GGGGCGCGTG
CTGCTGCTGG GGCACGCCGA TGTCGTCCTC ATCCGCACGG AGGAACGGCG CATGTTGGTG
CACACGCGCG ACGCCCAGTA CATCCACCAC GGTCCCGGCA CCCTGGACCG CCTGGAAGAA
AAACTTGCCG CCCTGTCCTT CTTTCGCGCC AACCGGGGCG AGCTGGTCAA CCTGACCCAG
GTCCGGGATT TCGCGCCCTG GTTCAACGGC AAATATCTGC TGACCATGCG CGATCATGCG
GCCACTGAAA TTACCGTCAG CAAGGCCCGG GTACGCGATT TCCGCGACCA ATTGGGTCTT
GCGTAG
 
Protein sequence
MTSPVRCLLV DDELPALDEL SYLLSEFEDV RIVGTAMSAS QAMEEIVRLR PEVVFQDIQM 
PGATGFHVLE RALKCPDPPL FVFATAYDQY AIRAFEENAV DYLLKPVSRE RLAKCLGRLR
SLLRQNEAGL AVQPKLEELL KGMGLGQPLV RISVEHRGRV LLLGHADVVL IRTEERRMLV
HTRDAQYIHH GPGTLDRLEE KLAALSFFRA NRGELVNLTQ VRDFAPWFNG KYLLTMRDHA
ATEITVSKAR VRDFRDQLGL A