Gene YpAngola_A3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3485 
Symbol 
ID5801961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3700864 
End bp3701580 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content45% 
IMG OID641341302 
Productputative two-component response-regulatory protein YehT 
Protein accessionYP_001607815 
Protein GI162418732 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.159726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAG TCATCATCGT CGACGATGAA CAACCTGCGC GTGAAGATTT ACGCGAAAGA 
CTGAATGAAG AACACGGTAT CGAGATCGTC GCCGAATGCA GCAATGCTCT GGAAGCAATT
CCTGCTATCC AGCGCCTACA GCCTGATGTG GTATTTCTCG ACATCCAGAT GCCCAGAATC
AATGGGTTAG AATTGGCCTC AATGCTGAAC CCTGAAAGCA TGCCACATAT CGTATTTGTC
ACCGCTTACG ATGAATATGC CATTCGCGCT TTTGAAGAAC ATGCTTTTGA CTATCTGTTA
AAACCACTCG ACCATCAACG TTTGGCGAAG ACACTGACAC GTCTAAGTCG CGATTTAATC
GTAAAGAATA ATTTACACAA AGTTATCGAA CCAATACTTC GTCATATCCC CTGTTCAGGC
CACAACCGTA TTTTTTTGCT GAAAATTGAA GAAGTAGAAT ACCTAAGCTC CGAGCTTAGC
GGGGTGCATG TGGTGGGAAC CGTGCAATCA GGTTATACCC AGCTATCGTT AAAAACACTG
GAGGAAAAAA CTCCGTTTAT TCGGTGCCAC CGGCAATATA TGGTGAATAC CGAACAATTG
GGGGAAATTC AGCTTATGGA TAATGGTGCG GCTGAAGTCA TCACTCGTTC AGGAAAGCAT
ATCCCTGTTA GCCGCCGCTA TTTAAAGTCC CTGAAGGAGA AATTAGGCAT CGCATAA
 
Protein sequence
MLRVIIVDDE QPAREDLRER LNEEHGIEIV AECSNALEAI PAIQRLQPDV VFLDIQMPRI 
NGLELASMLN PESMPHIVFV TAYDEYAIRA FEEHAFDYLL KPLDHQRLAK TLTRLSRDLI
VKNNLHKVIE PILRHIPCSG HNRIFLLKIE EVEYLSSELS GVHVVGTVQS GYTQLSLKTL
EEKTPFIRCH RQYMVNTEQL GEIQLMDNGA AEVITRSGKH IPVSRRYLKS LKEKLGIA