Gene VIBHAR_07024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07024 
Symbol 
ID5558428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2099997 
End bp2100788 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content45% 
IMG OID640911492 
Producttranscriptional regulator 
Protein accessionYP_001449125 
Protein GI156978219 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTG GGTTTACTGC GATTATTGCT GATGATGAAC CGTTATTGAG GCGTCATCTA 
GATAAAAGCC TAGCTGAAGT GTGGCCTGAG CTAGAGGTGA TAGCCAAAGT CGCGGATGGT
GAACAAGCGT TGCAGGCCAT TGAGCAAAGC CAACCTGACA TTGCGTTTCT TGATATTCGT
ATGCCAGTTT TGGATGGTAT GACATTAGCG CAAAAACTCA ATCAACTCGC CAACCCACCT
TTGATTGTAT TTGTCACTGC GTACGATGAT TACGCCATCA AAGCCTTTGA ACAAAATGCC
GCCGATTATT TGCTCAAGCC TATCTCGGAT GAGCGCCTCC TGACAACGTG TGAAAGAGTG
AAAGCACGCC TTGCTAAGCG AGAGCAAGAA AGCAGCAATG TGCAGATGAG CAGCCTGTTA
GAACAGTTGC AGCAATTATC CGCGCCACAA ACGCCGCAGT ATTTACAGTG GATCAAAGCG
ACGCAAGGGG AAGATATTCA TCTGATCGCC ACATCTGATG TGTTGTATTT CAAAGCGGAA
GAAAAATACG TTTCTGTATA TGCGCAGCAA GGACAAGGCA AAGTACAAGA GTATTTGATT
CGCACATCGT TGAAAGAGTT GATAGGGCAG CTTAACCCAG AACAGTTCTG GCAAGTGCAC
CGTTCAAGCG TGGTGCAAGT ATGTAAAATT AACAAAGTAA ACAAAGACTT TGCTGGCAGA
ATGTTTGTTC ACGTTGGAGA AAACAAGCTC CCTGTGAGCC GTGCATCTCA AAGTTTGTTC
AAAGGGATGT AA
 
Protein sequence
MNTGFTAIIA DDEPLLRRHL DKSLAEVWPE LEVIAKVADG EQALQAIEQS QPDIAFLDIR 
MPVLDGMTLA QKLNQLANPP LIVFVTAYDD YAIKAFEQNA ADYLLKPISD ERLLTTCERV
KARLAKREQE SSNVQMSSLL EQLQQLSAPQ TPQYLQWIKA TQGEDIHLIA TSDVLYFKAE
EKYVSVYAQQ GQGKVQEYLI RTSLKELIGQ LNPEQFWQVH RSSVVQVCKI NKVNKDFAGR
MFVHVGENKL PVSRASQSLF KGM