| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3668 |
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| Symbol | |
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| ID | 3966625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4650532 |
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| End bp | 4651263 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922765 |
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| Product | two-component response regulator AlgR |
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| Protein accession | YP_529135 |
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| Protein GI | 90023308 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00827536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.334671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTC TAATTGTTGA TGATGAGCCA CTGGCAAGGT TGCGCCTGCA GCGACTTATT
GATGCGCTGC CCGACTATAC CGTGGTAGGT GAGGCTGCCA ATGGCGACGA AGCTATAGAG
GCCACCTTAC GGCTCGACCC CGATATTGTG CTTACCGACA TTCGTATGCC AGGCAAAGAT
GGCCTCGAAG CTGCTCACGT AATATCGGCT ATGGAAGATC CACCCGCCTT AATTTTTTGC
ACCGCCTACG ATGAATACGC GCTGCAGGCT TTCGAAACCC TTGCTGCGGG GTATTTGCTT
AAACCTGTAA AAGAAGAGCA GTTGCGCGCC GCGCTAGAAA AAGTAACGCG TACAACTAAA
GTGCAAAAAT CGGCGTTAAA GCAAGTGGAA GAAGGAGCCA GCCGCCAGCA TATAGCCGCA
AAAACACGGC GCGGTACCGA GCTTATCCCA ATAGACGATA TTTACTGTTT TATCGCTGAC
CAAAAATACG TAACGGTATA CCACGCCGAA GGGGAAACCC TTATCGACGA TACCCTAAAA
GAGCTAGAAG AAGAGTTTGC CCAGCGCTTT GTGCGCATTC ACCGCAATGC TCTGGTCGCG
ATTAAAGGCA TAGTGGGCAT GGAAAAAACC GCAGAAGGGC AATACGCAGT GTGTATAAAA
GATAGCGAAT ACCGCCCACT GGTAAGCCGT CGTCACCTTT CGGGCGTACG CGACTTACTT
AACCGTCTGT AG
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| Protein sequence | MHILIVDDEP LARLRLQRLI DALPDYTVVG EAANGDEAIE ATLRLDPDIV LTDIRMPGKD
GLEAAHVISA MEDPPALIFC TAYDEYALQA FETLAAGYLL KPVKEEQLRA ALEKVTRTTK
VQKSALKQVE EGASRQHIAA KTRRGTELIP IDDIYCFIAD QKYVTVYHAE GETLIDDTLK
ELEEEFAQRF VRIHRNALVA IKGIVGMEKT AEGQYAVCIK DSEYRPLVSR RHLSGVRDLL
NRL
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