| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0190 |
|---|
| Symbol | |
|---|
| ID | 3916178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 195378 |
|---|
| End bp | 196112 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640442916 |
|---|
| Product | LytR/AlgR family transcriptional regulator |
|---|
| Protein accession | YP_495473 |
|---|
| Protein GI | 87198216 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.625509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCACGT TGATAGTCGA CGACGAACCG CTGGCGGTGG AGCGCATGCA GATCCTCTGC
GCGCGCATCC CCGCGCTCCA GGTGGTGGGG ACCGCAAGCG ACGGCGCCGC CGCGCTTCGC
CTGATCGAGG CGCTCGCGCC CGACCTCGTT CTGCTCGACA TGACCATGCC CGAAGTGGAC
GGCCTTGGCG TTGCCCGGGC TCTGGCCGGA CAGGCCAGCC GCCCTGCCGT GGTCTTCGTC
ACCGCGCACG ACGATTTCGC CGTCGAGGCC TTCGACTGCG ATGCGGTCGA TTACGTGCTG
AAGCCGGTTG CGCAGGAGCG GCTGGAGCGC GCGGTGGAAC GTGCGCAGGC CCGTCGCAGC
GCGGCCCCTG AAACGCCGTT GACGCCGGAA CGGGCCGCGA GCGAATGGAT CGAGGAATTC
TGGGTTCCTC ACCGCTCCGA ACTTATCCGC GTGGCGGCTT CCGATCTCGA ACGCATCGAC
GCCGAACGCG ACTATGTGCG CCTGCACGTC GGGCAGAGGT CGTACCTGAT GCTTCACACC
ATCGCGGGCC TCGAAGCACG GCTCGACCCG GATCGCTTCA TCCGGCTTCA CCGCTCCACC
ATCGTCCGCC GCGACCGAAT CGCCGGCCTG AAACACGATG GTCTCGGCGT CTGGTCGGCG
GAACTCGCGG ATGGCACGAT GCAACGCATC GGCCGCACCT ATCTCGCGCG GGTCAAGGCG
ATGGCCGGGC GCTAG
|
|---|
| Protein sequence | MRTLIVDDEP LAVERMQILC ARIPALQVVG TASDGAAALR LIEALAPDLV LLDMTMPEVD
GLGVARALAG QASRPAVVFV TAHDDFAVEA FDCDAVDYVL KPVAQERLER AVERAQARRS
AAPETPLTPE RAASEWIEEF WVPHRSELIR VAASDLERID AERDYVRLHV GQRSYLMLHT
IAGLEARLDP DRFIRLHRST IVRRDRIAGL KHDGLGVWSA ELADGTMQRI GRTYLARVKA
MAGR
|
|---|
| |