More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_4304 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011830  Dhaf_4304  response regulator receiver and SARP domain protein  100 
 
 		 349 aa  717    Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0410  response regulator receiver and SARP domain protein  34.15 
 
 		 376 aa  201  9.999999999999999e-51  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000633698  n/a   
 
 
-
 
NC_011830  Dhaf_0497  response regulator receiver and SARP domain protein  33.43 
 
 		 363 aa  177  2e-43  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000475999  n/a   
 
 
-
 
NC_011830  Dhaf_1614  response regulator receiver and SARP domain protein  30.25 
 
 		 376 aa  154  2e-36  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.401218  n/a   
 
 
-
 
NC_011830  Dhaf_0495  response regulator receiver and SARP domain protein  29.1 
 
 		 365 aa  154  2.9999999999999998e-36  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000108458  n/a   
 
 
-
 
NC_011830  Dhaf_1568  response regulator receiver and SARP domain protein  30.42 
 
 		 288 aa  149  7e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0553389  n/a   
 
 
-
 
NC_011830  Dhaf_4408  two component transcriptional regulator, LytTR family  42.62 
 
 		 268 aa  109  6e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  45.38 
 
 		 238 aa  101  2e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  45.38 
 
 		 238 aa  101  2e-20  Yersinia pestis Angola  Bacteria  normal  1  normal  0.159726 
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  45.38 
 
 		 238 aa  101  2e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  38.89 
 
 		 251 aa  99.8  7e-20  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  36.76 
 
 		 260 aa  97.1  4e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal  1 
 
 
-
 
NC_007517  Gmet_2697  LytR/AlgR family transcriptional regulator  39.2 
 
 		 240 aa  97.1  4e-19  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_0190  LytR/AlgR family transcriptional regulator  40 
 
 		 244 aa  95.9  1e-18  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.625509  n/a   
 
 
-
 
NC_010571  Oter_2328  LytTR family two component transcriptional regulator  36.09 
 
 		 255 aa  94.7  2e-18  Opitutus terrae PB90-1  Bacteria  normal  0.261765  decreased coverage  0.00199939 
 
 
-
 
NC_007908  Rfer_2452  putative two-component response-regulatory protein YehT  43.36 
 
 		 238 aa  94.7  2e-18  Rhodoferax ferrireducens T118  Bacteria  normal  0.0310324  n/a   
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  39.83 
 
 		 266 aa  94.7  2e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  38.06 
 
 		 255 aa  94.4  3e-18  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  33.55 
 
 		 252 aa  94  4e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_008025  Dgeo_2199  response regulator receiver/SARP domain-containing protein  27.11 
 
 		 344 aa  94  4e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.425276 
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  38.79 
 
 		 239 aa  94  4e-18  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0161  LytR/AlgR family transcriptional regulator  42.61 
 
 		 270 aa  93.6  5e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_2685  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  93.6  5e-18  Shewanella baltica OS223  Bacteria  normal  0.0538398  hitchhiker  0.000367908 
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  38.06 
 
 		 244 aa  93.6  5e-18  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal  1 
 
 
-
 
NC_009052  Sbal_1673  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  93.6  5e-18  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000537167  n/a   
 
 
-
 
NC_009997  Sbal195_1695  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  93.6  5e-18  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal  1 
 
 
-
 
NC_009665  Shew185_1658  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  93.6  5e-18  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000153786  n/a   
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  37.93 
 
 		 239 aa  93.2  7e-18  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2397  two component transcriptional regulator, LytTR family  37.29 
 
 		 261 aa  92  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_0119  response regulator receiver protein  37.07 
 
 		 249 aa  92  1e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3544  two component transcriptional regulator, LytTR family  38.46 
 
 		 251 aa  92.4  1e-17  Geobacter lovleyi SZ  Bacteria  normal  0.0394969  n/a   
 
 
-
 
CP001509  ECD_02054  predicted response regulator in two-component system withYehU  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_1533  two component transcriptional regulator, LytTR family  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli DH1  Bacteria  normal  0.726215  n/a   
 
 
-
 
NC_012892  B21_02012  hypothetical protein  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  32.04 
 
 		 241 aa  90.9  3e-17  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_3112  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.148941 
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  42.37 
 
 		 248 aa  91.3  3e-17  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A2259  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.9  3e-17  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.5  4e-17  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.5  4e-17  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.5  4e-17  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal  1 
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.5  4e-17  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  38.98 
 
 		 237 aa  90.5  4e-17  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_2883  putative two-component response-regulatory protein YehT  40.68 
 
 		 236 aa  90.5  4e-17  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000903631  unclonable  0.0000000000401288 
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.5  4e-17  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_3718  response regulator  40.35 
 
 		 275 aa  90.1  5e-17  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_0919  putative two-component response-regulatory protein YehT  37.07 
 
 		 239 aa  90.1  5e-17  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2432  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  89.7  6e-17  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000158974  hitchhiker  0.00361478 
 
 
-
 
NC_004347  SO_2823  putative two-component response-regulatory protein YehT  42.37 
 
 		 236 aa  89.7  7e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007925  RPC_1083  putative two-component response-regulatory protein YehT  36.44 
 
 		 239 aa  89.7  7e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.450563  normal  1 
 
 
-
 
NC_008322  Shewmr7_2502  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  89.4  8e-17  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00178929  normal  0.0452702 
 
 
-
 
NC_008577  Shewana3_2594  putative two-component response-regulatory protein YehT  41.53 
 
 		 236 aa  89.4  8e-17  Shewanella sp. ANA-3  Bacteria  normal  0.0103906  hitchhiker  0.00157605 
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  34.4 
 
 		 252 aa  89.4  8e-17  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  38.46 
 
 		 275 aa  89.4  9e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_009483  Gura_2791  LytTR family two component transcriptional regulator  40.19 
 
 		 250 aa  89.4  9e-17  Geobacter uraniireducens Rf4  Bacteria  normal  0.073585  n/a   
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  33.1 
 
 		 243 aa  89  1e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0063  response regulator receiver:LytTr DNA-binding region  43.22 
 
 		 248 aa  89  1e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_0480  response regulator receiver domain-containing protein  29.79 
 
 		 265 aa  88.6  1e-16  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_1393  two component transcriptional regulator, LytTR family  38.89 
 
 		 238 aa  89  1e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000000160197 
 
 
-
 
NC_008146  Mmcs_4051  response regulator receiver protein  36.97 
 
 		 269 aa  89  1e-16  Mycobacterium sp. MCS  Bacteria  normal  0.243327  n/a   
 
 
-
 
NC_008699  Noca_0357  response regulator receiver  41.74 
 
 		 249 aa  89.4  1e-16  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4126  response regulator receiver protein  36.97 
 
 		 269 aa  89  1e-16  Mycobacterium sp. KMS  Bacteria  normal  0.217512  normal  0.408771 
 
 
-
 
NC_008751  Dvul_2356  response regulator receiver protein  34.87 
 
 		 257 aa  88.6  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.325932  normal  0.149931 
 
 
-
 
NC_009077  Mjls_4280  response regulator receiver protein  36.97 
 
 		 269 aa  89  1e-16  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2093  putative two-component response-regulatory protein YehT  29.94 
 
 		 237 aa  87.8  2e-16  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010424  Daud_0469  response regulator receiver protein  36.75 
 
 		 254 aa  88.6  2e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  36.8 
 
 		 260 aa  88.2  2e-16  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_009675  Anae109_1440  putative two-component response-regulatory protein YehT  39.82 
 
 		 236 aa  87.4  3e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_0388  two component transcriptional regulator, LytTR family  35.59 
 
 		 233 aa  87.4  3e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0068  two component transcriptional regulator, LytTR family  36.8 
 
 		 244 aa  87.4  3e-16  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00288448  normal  1 
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  30.94 
 
 		 241 aa  87  4e-16  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_012917  PC1_3149  putative two-component response-regulatory protein YehT  36.8 
 
 		 238 aa  87.4  4e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1114  LytTR family two component transcriptional regulator  42.59 
 
 		 249 aa  87  4e-16  Opitutus terrae PB90-1  Bacteria  normal  0.677936  normal  1 
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  38.14 
 
 		 238 aa  86.7  5e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_1548  putative two-component response-regulatory protein YehT  40.68 
 
 		 236 aa  87  5e-16  Shewanella putrefaciens CN-32  Bacteria  normal  0.496368  n/a   
 
 
-
 
NC_009511  Swit_4495  LytTR family two component transcriptional regulator  31.93 
 
 		 245 aa  86.7  6e-16  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17015 
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  36.89 
 
 		 248 aa  86.7  6e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal  1 
 
 
-
 
NC_007333  Tfu_2858  response regulator receiver  37.3 
 
 		 264 aa  86.3  7e-16  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_1375  response regulator receiver protein  33.58 
 
 		 239 aa  86.3  7e-16  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  36.89 
 
 		 248 aa  86.3  7e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  36.52 
 
 		 253 aa  86.3  8e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal  1 
 
 
-
 
NC_009511  Swit_2974  LytTR family two component transcriptional regulator  40.32 
 
 		 266 aa  85.9  9e-16  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.318128 
 
 
-
 
NC_009654  Mmwyl1_3341  putative two-component response-regulatory protein YehT  39.17 
 
 		 244 aa  85.9  9e-16  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.798853 
 
 
-
 
NC_009253  Dred_2957  response regulator receiver protein  36.44 
 
 		 236 aa  85.9  9e-16  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00954821  n/a   
 
 
-
 
NC_008700  Sama_1281  putative two-component response-regulatory protein YehT  29.33 
 
 		 236 aa  85.1  0.000000000000001  Shewanella amazonensis SB2B  Bacteria  normal  0.155887  normal  0.0159688 
 
 
-
 
NC_008726  Mvan_4560  response regulator receiver protein  39.47 
 
 		 269 aa  85.1  0.000000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.850639 
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  40.71 
 
 		 248 aa  84.7  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1964  LytR/AlgR family transcriptional regulator  34.75 
 
 		 255 aa  84.7  0.000000000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.777054 
 
 
-
 
NC_013216  Dtox_0399  two component transcriptional regulator, LytTR family  34.51 
 
 		 242 aa  84.7  0.000000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_0699  response regulator receiver  38.26 
 
 		 275 aa  85.1  0.000000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_2278  LytTr DNA-binding response regulator  39.66 
 
 		 280 aa  84.3  0.000000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.421967  n/a   
 
 
-
 
NC_011830  Dhaf_3686  two component transcriptional regulator, LytTR family  31.45 
 
 		 251 aa  84.3  0.000000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04138  two-component system regulatory protein  36 
 
 		 245 aa  83.6  0.000000000000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.739319  n/a   
 
 
-
 
NC_009338  Mflv_2143  response regulator receiver protein  41.07 
 
 		 265 aa  83.6  0.000000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.390763  normal  0.164671 
 
 
-
 
NC_013730  Slin_1723  two component transcriptional regulator, LytTR family  32.48 
 
 		 232 aa  83.6  0.000000000000005  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4846  LytTR family two component transcriptional regulator  40.52 
 
 		 246 aa  82.8  0.000000000000007  Shewanella woodyi ATCC 51908  Bacteria  normal  0.568582  normal  1 
 
 
-
 
NC_007973  Rmet_1381  LytR/AlgR family transcriptional regulator  45.98 
 
 		 273 aa  83.2  0.000000000000007  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.557466 
 
 
-
 
NC_009832  Spro_4587  putative two-component response-regulatory protein YehT  36.61 
 
 		 241 aa  82.8  0.000000000000007  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
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