| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2432 |
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| Symbol | |
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| ID | 4253003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2894490 |
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| End bp | 2895200 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119064 |
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| Product | putative two-component response-regulatory protein YehT |
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| Protein accession | YP_734560 |
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| Protein GI | 113970767 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000158974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00361478 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCACTT GTTTAATTGT CGATGATGAA TTGTTTGCCC GCGAGGAGCT TGCCGATTTG
CTCGGCCAAG AAGCCGATAT TGAGATTATC GGCCAATGCT CCAATGCAAT TGAAGCACTG
CAAACCATCG CCAAAGAAAA ACCCCAACTG ATTTTTCTCG ACATCCAAAT GCCGCGGATT
TCCGGCATGG AGCTGATTGC TATGCTCGAT CCTGACACTT TGCCTAAAAT CGTCTTCGTG
ACCGCATTCG ATGAGTTTGC CATAAAAGCC TTTGATAATC ATGCCTTTGA TTATCTGCTC
AAACCCATAG ATGCCGAGCG CCTCAGCCAA ACCTTAAAAC GGGTGCGAAA GGATCTCACC
CCGCAAGCCG TGAATCTTAT CGCGCCAGCC ACTCTGGAGC ATTTACCCTG TTACAGCGGC
AGTAAGTTAA AAGTGATACC CATTCAAGAT GTTGAATATG TGTTTAGCGA TTTAAGCGGT
ATTCATGTCG CCTGTACCAA AGGCAAGGTC CATACCCAAC TCACCCTTAG AGTGTTGGAA
GAAAAAACGC CGCTGGTGCG TTGCCATCGC CAATATCTGA TTTCACCAAA AGCCATTGCC
GAGATAGAAC TGCTCGATAC AGGAGCCGAA GTCACCACCT TGCTTGGCGA CAAAGTGCCC
GTGTCCCGCC GCTACCTCAA AAGCCTTAAG CAATTGTTTG GCTTCCAATA G
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| Protein sequence | MITCLIVDDE LFAREELADL LGQEADIEII GQCSNAIEAL QTIAKEKPQL IFLDIQMPRI
SGMELIAMLD PDTLPKIVFV TAFDEFAIKA FDNHAFDYLL KPIDAERLSQ TLKRVRKDLT
PQAVNLIAPA TLEHLPCYSG SKLKVIPIQD VEYVFSDLSG IHVACTKGKV HTQLTLRVLE
EKTPLVRCHR QYLISPKAIA EIELLDTGAE VTTLLGDKVP VSRRYLKSLK QLFGFQ
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