| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0068 |
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| Symbol | |
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| ID | 8331393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 70063 |
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| End bp | 70797 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953235 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003110864 |
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| Protein GI | 256389300 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00288448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG CAACGCCGAC CGGCCTGCGC GTGCTGGTCG TCGATGACGA ACCCCCAGCC
GTCGCCGAAC TCGCCTACCT CCTGTCCCGC GACCCTCGCG TCTCCTCCGT ACGGACCGCT
ACCGACGGAG AGGACGCACT GCGGGTCCTG AAGAACTCTC CTGTAGACGC ACTGTTCCTC
GACATCCGTA TGCCCGGCCT GGACGGTCTG GAGATAGCGG CGCTCCTGAA CCAGTTCGCC
ACTCCGCCAC AGATCGTCTT CGTGACCGCA CATGAGGAGT TCGCTCTGGA GGCGTTCGAC
CTCCACGCCT CCGACTACAT CCTCAAACCG GTACGCGCCG AACGCCTCGC GGAAGCTCTC
CGCCGGATGA CACCGGCATC CGCACCACCT AGGGCCCCCG AAGCGGGGCC CTACGACGTC
ATCCCTGTGG AGCTGGCCGG CGTCACACGC TTCATCCCGC GCCAAGAGGT CTCCTATGCG
GAAGCGCAAG GCGATTACGT GCGCTTGTAC ACAGCCAGCA GCAGCCACCT GGTCCGCATC
CCCTTGGCGG TCCTGGAGGA GCACTGGTCC GGCGCCGGCT TCGCGCGGAC GCATCGCCGT
TTCCTGGTTC GTGTCGACGC CGTCTCCGAG GCGCGGTGGG AGAGCGGCCA CCTGACCGTC
ATCGTCGGCG GAGTCCCCAT CCCCGTGGCG CGTCGGCACA CCCGTGAAGT GCGCGAACGG
CTCAGTCACC GCTGA
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| Protein sequence | MTIATPTGLR VLVVDDEPPA VAELAYLLSR DPRVSSVRTA TDGEDALRVL KNSPVDALFL
DIRMPGLDGL EIAALLNQFA TPPQIVFVTA HEEFALEAFD LHASDYILKP VRAERLAEAL
RRMTPASAPP RAPEAGPYDV IPVELAGVTR FIPRQEVSYA EAQGDYVRLY TASSSHLVRI
PLAVLEEHWS GAGFARTHRR FLVRVDAVSE ARWESGHLTV IVGGVPIPVA RRHTREVRER
LSHR
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