| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0399 |
|---|
| Symbol | |
|---|
| ID | 8427334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 409886 |
|---|
| End bp | 410614 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 645032787 |
|---|
| Product | two component transcriptional regulator, LytTR family |
|---|
| Protein accession | YP_003189965 |
|---|
| Protein GI | 258513743 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAAG CAAGAGTACT AATTGTTGAA GACAATGAAG ATGTTCGTGA GCATATTAAA
ACCATTATCA ATACACAAGC AGATTTTACC GTGGTTGGAG AGTGTGGTAA TGGCAATGAA
GTTTTAGACT TGGTAGAAAA ATATCACCCT AATATCGTTC TTTTAGATAT AGAAATACCG
AGCAGGACTG GAATAGATGT AGCGAAAGAT CTAGCCGAAT TAAAACCCGG TATATTCTTA
ATTTTTATTA CGGGGCATTC TGAATTTTGT CTGACAGCAT TCGAAATAAA ATCACTTGAT
TATATACTAA AACCATTTAC AGAGGAGCGG GTTATTTCTT CTCTACTGAG GGCTAAATCA
TTCTTAAATT GTTTGAATCC GGCTTTCGTT AATATGTCTC GTATTTCTAT AAAGACAAGA
GGGGGAACTA TCATTTTTAT TGAAGCCAAA TCTATTTCTT ACATAGAAAA AGTTAAAGGT
ATAAAGTATA TTAGCATTTA TACTGACCAT GGTTACTACA ACATCACTGA GACTTTGAAT
GATATAGAGG CCAAGCTTCC TGAACAATTT TACCGGTGTC ATAAATCATT TATTATTAAC
CTGGAACGGG TGAAAGCTTT GGTACGGGAT GGGCTGAACA CCTTTCATGT TTTATTGAAT
AATAGTAAAC AAAAAGTTTC TGTTAGCAAA TATCATTACG ATGAATTGAT AAAAAAGTTG
AATAGCTAA
|
|---|
| Protein sequence | MLEARVLIVE DNEDVREHIK TIINTQADFT VVGECGNGNE VLDLVEKYHP NIVLLDIEIP
SRTGIDVAKD LAELKPGIFL IFITGHSEFC LTAFEIKSLD YILKPFTEER VISSLLRAKS
FLNCLNPAFV NMSRISIKTR GGTIIFIEAK SISYIEKVKG IKYISIYTDH GYYNITETLN
DIEAKLPEQF YRCHKSFIIN LERVKALVRD GLNTFHVLLN NSKQKVSVSK YHYDELIKKL
NS
|
|---|
| |