Gene Psyr_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0063 
Symbol 
ID3365538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp62645 
End bp63391 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID637650406 
Productresponse regulator receiver:LytTr DNA-binding region 
Protein accessionYP_233175 
Protein GI66043334 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC TGATCGTTGA TGACGAACCC CTGGCCCGCG AGCGATTGAG CCGCATGGTC 
AATGAAATCG AGGGTTATCG AGTACTGGAA CCCAGCGCGT CCAATGGCGA AGAAGCCTTG
GCGCTGATCG AGGCCCACAA ACCGGACGTA GTGCTGCTCG ATATCCGCAT GCCGGGCCTC
GATGGCCTCC AGGTCGCAGC GCGGCTGTGC GAGCGGGAAG CACCGCCCGC AGTGGTCTTT
TGCACAGCCC ATGATGAGTT CGCCCTGGAA GCTTTCCAGG TCAGTGCGGT GGGCTATCTG
GTCAAGCCCG TGCGTTCCGA GCACCTTGTC GAAGCGTTGC GCAAAGCCGA GCGGCCGAAC
CGTGTGCAAC TGGCGGCGTT GACCCGCCCG GCTGCCGAAA GCGGATCAGG GCCACGCAGC
CATATCAGCG CGCGTACCCG CAAAGGCATC GAGCTGATTC CGCTGGATCA GGTGATCTAC
TTTATCGCCG ATCACAAGTA CGTGACCTTG CGCCACGAGG GCGGCGAAGT GCTGCTGGAC
GAACCGCTCA AGGCACTGGA AGACGAATTC GGTGACCGTT TCGTGCGCAT CCACCGCAAT
GCGCTGGTGG CCCGCGAGCG AATAGAACGG TTGCAGCGCA CCCCGCTGGG GCATTTCCAG
CTGTTCCTCA GAGGCCTCAA TGGCGATGCG TTGATCGTCA GCCGCCGCCA CGTCGCCGGT
GTCCGCAAAA TGATGCAGCA GCTCTAG
 
Protein sequence
MNVLIVDDEP LARERLSRMV NEIEGYRVLE PSASNGEEAL ALIEAHKPDV VLLDIRMPGL 
DGLQVAARLC EREAPPAVVF CTAHDEFALE AFQVSAVGYL VKPVRSEHLV EALRKAERPN
RVQLAALTRP AAESGSGPRS HISARTRKGI ELIPLDQVIY FIADHKYVTL RHEGGEVLLD
EPLKALEDEF GDRFVRIHRN ALVARERIER LQRTPLGHFQ LFLRGLNGDA LIVSRRHVAG
VRKMMQQL