Gene Mvan_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4560 
Symbol 
ID4649024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4900170 
End bp4900979 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID639808030 
Productresponse regulator receiver protein 
Protein accessionYP_955341 
Protein GI120405512 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.850639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGAC CACTGACCGT GCTCGCCGTC GACGACGAGG CGCCCGCCCT CGACGAGCTC 
GCCTACCTTC TCGGCAAGCA CCCGTGCGTC GCCGAGGTCT TCCGTGCCGG CGACGCCACT
TCGGCACTGC GGGAACTGAA TCGGCGAACC ATCGACGCGG TGTTCCTCGA CATCAACATG
CCCGGCCTTT CCGGGATCGA ACTCGCCGGG GTGTTGACCA ACTACACCCA GCGCCCGGCG
ATCGTGTTCG TCACCGCCCA CGATGACAAG GCGGTCGCCG CCTTCGACGT GGGTGCCGTC
GACTATCTGC TCAAACCGAT CAGGGAGGAC CGCCTCGACG AAGCGGTCCG ACGCGCCGCG
ACGGCCCACC CCGCGACACC GGCGGCTGCG TCCAGGACCG AGACCGGCGC CGCGGCGCCC
GATTCCGACG TCATCCCGGC CGAGCTCGGC GGCGTGACCC ACCTGATCCC CCGCGACAGC
ATCGGCTGGG TCGAAGCCGA AGGCGATTAC GCCCGGCTGC ACTCGGCGTC CGGATCACAC
CTGGTGCGCA TCCCGCTCAG CACACTCGAA ACACGTTGGC GCGACCATGG ATTCCAGCGT
GTGCACCGCT CGTATCTGGT CGCGCTGCGC CTCGTCACCG GCCTGCGCAC CACCGACGGC
GCCGTCCTGG TCCGGCTCCG CGCCAACGGC TCGTCCCCCG CGGTCGAGCT TCCGGTGAGC
CGGCGCCAGG CCCGCGAACT GCGGGATCGC GTGGTACGCA ACCCGATGCG CAGCCTGCGA
CCGGCCGGGA GCACCGATGA CCAGCAGTGA
 
Protein sequence
MTRPLTVLAV DDEAPALDEL AYLLGKHPCV AEVFRAGDAT SALRELNRRT IDAVFLDINM 
PGLSGIELAG VLTNYTQRPA IVFVTAHDDK AVAAFDVGAV DYLLKPIRED RLDEAVRRAA
TAHPATPAAA SRTETGAAAP DSDVIPAELG GVTHLIPRDS IGWVEAEGDY ARLHSASGSH
LVRIPLSTLE TRWRDHGFQR VHRSYLVALR LVTGLRTTDG AVLVRLRANG SSPAVELPVS
RRQARELRDR VVRNPMRSLR PAGSTDDQQ