| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2328 |
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| Symbol | |
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| ID | 6206812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3016694 |
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| End bp | 3017461 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691983 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001819210 |
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| Protein GI | 182414144 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.261765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00199939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAAGC CACGTGCATT GATCGTCGAT GACGAGCCGC TCGCGCGCGA GCGCCTGCAG
CGGCTGCTCC AGCGTCAGAA CACTGTGGAA CTGGCCGGCG AATGTGGCGA CGGACCGGAC
GCGCTGGCCA CCATTGAACG CGAACGGCCG GATATCGTTT TTCTCGATGT GCAGATGCCG
GGCTGCAGCG GACTCGACGT GGCAAATCAG CTGCCGGCCA CCGCGCGCCC GGCGATCATC
TTCGTGACCG CGCATGAGCG CTTCGCCGTC GAAGCGTTCG CCGCCCGCGC GGTCGACTAT
CTGCTCAAAC CCTTCGACGA GGAACGACTG CACCAAGCGG TCGAGCGCGC GCTCGAGCTG
CTCCAATCGC GCCAAGCGCG CGAGGTGGAA ACGCGGCTGG AGAGCATCCT GGCCCAGGTC
CAGCCGCGGG TGCCCGAACG GATCGCGGTG CGCGTCGACG GCCGGATTGT TTTCGTCAAG
CCCCGGGAGG TCGTCTGGAT CGAGGCCGCC AACAACTACT GCGTGCTCCA CCTCACGGAT
GCGCCGCGGC TCATGCTGCG CGAATCCCTC GGCTCAGTCG AACAACGGCT GGGCGCTGCG
AACTTCGCCC GGATCAGTCG CTCGGCGGTG GTCCGCTCCG ATCAAATCAA GGAACTCGAG
TCGGCGAACT ACGGCGAATA CGTGGTGGTC TTGCTGAACG GCACCCGACT CCCCCTCAGC
CGATACCGTC GCAACGAGCT CGAAAGAGCT CTGACCGAAG CGCGGTGA
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| Protein sequence | MTKPRALIVD DEPLARERLQ RLLQRQNTVE LAGECGDGPD ALATIERERP DIVFLDVQMP
GCSGLDVANQ LPATARPAII FVTAHERFAV EAFAARAVDY LLKPFDEERL HQAVERALEL
LQSRQAREVE TRLESILAQV QPRVPERIAV RVDGRIVFVK PREVVWIEAA NNYCVLHLTD
APRLMLRESL GSVEQRLGAA NFARISRSAV VRSDQIKELE SANYGEYVVV LLNGTRLPLS
RYRRNELERA LTEAR
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