Gene Moth_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_2172 
Symbol 
ID3831642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp2272963 
End bp2273721 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID637830094 
ProductLytR/AlgR family transcriptional regulator 
Protein accessionYP_431004 
Protein GI83590995 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0721488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0255714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTA AAGCCTTGAT TGTCGATGAC GAATACCCGG CACGCCAGGA ACTCCGTTTT 
ATGCTCCAGG AATTTAAGGA TATCGAAGTT GTCGGCGAGG CTACCAATGC CCGGGAGACC
TTAAACCTGG TCAGCGCCCT TGATTATACC ATCCTTTTCC TCGATATCAA CATGCCCGGG
ATGAACGGCC TGGAGCTCTC CCGGGCCATC CAGAAACGAC CCAACCCGCC CTTTATTATT
TTTGTCACGG CCTATGAGGA ATACGCCCTG CAGGCCTTTG AGGTCAATGC TGTAGACTAT
CTCTTAAAGC CCTTCGATGA AAAACGCCTG CGCCAGGCTA TCGATAAGGT CCGGCGCCTG
GTGGAACAGC GCCAGCAGCC GGCGGTACCG GCCGGCGAGG CCGCTCATGG TGGCAAAGGT
CGTCTGAACC GCCTCCCGGT GGAAAAGGAA GGCAAGACCA TCCTCCTGGA CCAGGATGAC
CTTATTTACG CCTGTACCCA GGGGGATAAC GTCTACCTGA AGACCTCGAC CGATCAGTAC
CTGACCCGTT TCACCCTCAA GGAGCTGGAG AGCCGCCTGG ACCCCCGGAG TTTCTTCCGC
TGCCATCGCT GCTACATTGT CAACCTGAAC CGGGTGCGCG AGCTGGTCCC CTTCTTTAAC
GGTACTTATA CCCTGATCAT GGCCGACAAA CAGCAAAGCG AGGTCCCTGT GAGCCGCAAC
CAGGCCCGGA AGCTAAAGAG CCTCCTGGGT ATTAACTAA
 
Protein sequence
MTLKALIVDD EYPARQELRF MLQEFKDIEV VGEATNARET LNLVSALDYT ILFLDINMPG 
MNGLELSRAI QKRPNPPFII FVTAYEEYAL QAFEVNAVDY LLKPFDEKRL RQAIDKVRRL
VEQRQQPAVP AGEAAHGGKG RLNRLPVEKE GKTILLDQDD LIYACTQGDN VYLKTSTDQY
LTRFTLKELE SRLDPRSFFR CHRCYIVNLN RVRELVPFFN GTYTLIMADK QQSEVPVSRN
QARKLKSLLG IN