| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0480 |
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| Symbol | |
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| ID | 3966038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 592109 |
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| End bp | 592906 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919543 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525956 |
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| Protein GI | 90020129 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CAAAGCTTCC GAGCCTGAGG ACGGTCATCG TCGAAGATGA GCCCATAGCC
ATGCTGCAAA TGAAGAGCAT GCTCCAGGGC TGCCCAACTA TCGAAATAGT GGGCGAGGCG
CGCAATGGAA AGCAGGCGTT AGACGTTATT CAGGATGTAC AACCCGATTT AGTGTTTTTA
GATATTCAAA TGCCGGTGTT AACGGGGTTT GAAGTGTTGA AAGCACTGCA AGGCGATACC
TTGCCGCTAA TCGTATTTAC CACCGCTTAC GAAGAGTATG CCGTGCAGGC GTTCGACTTG
CACGCCGTAG ACTACCTATT AAAGCCCTTT AGCGAAGAGC GTTTAAATAA AGCGCTAGCC
CGGGTAATGG AACGCTGGCA ACTGGCCGAA GAAGATCAAA AAGGCACACT GTTACAAGCG
GTGGAATTTA TTCTAAATAA AGGCGAGGGG CCGTCGGTTA GCGCAGGTGC AGAGCCTAAA
TTAGCCATTA AAGAGTCCGG CGAGGTACTG TTAATTCCGC AAACAGAAAT TGATTGGGTC
GATGCAGCGG GTGATTACAT GTGCATTCAC TCCAAAGGGC AAACTCATAT ACAGCGCTGC
ACAATGAAGC AGTTGCTAGA AAAACTAGAT AGCCGCCGCT TTTGCAGAAT CCACCGCTCC
ACCGTTGTGA ATGTGGATCG CATTACCAAA GTAATTCCAC ACACCAAAGG CGAAAGTTTT
TTAATGTTAG ATTGCGGCGA AAAATTAAAA GTAAGCCGCA ATTGTCGCGA AGCTATTCAG
CAATTTTTAG CATCGTAA
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| Protein sequence | MSEPKLPSLR TVIVEDEPIA MLQMKSMLQG CPTIEIVGEA RNGKQALDVI QDVQPDLVFL
DIQMPVLTGF EVLKALQGDT LPLIVFTTAY EEYAVQAFDL HAVDYLLKPF SEERLNKALA
RVMERWQLAE EDQKGTLLQA VEFILNKGEG PSVSAGAEPK LAIKESGEVL LIPQTEIDWV
DAAGDYMCIH SKGQTHIQRC TMKQLLEKLD SRRFCRIHRS TVVNVDRITK VIPHTKGESF
LMLDCGEKLK VSRNCREAIQ QFLAS
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