Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0480 |
Symbol | |
ID | 3966038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 592109 |
End bp | 592906 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919543 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_525956 |
Protein GI | 90020129 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC CAAAGCTTCC GAGCCTGAGG ACGGTCATCG TCGAAGATGA GCCCATAGCC ATGCTGCAAA TGAAGAGCAT GCTCCAGGGC TGCCCAACTA TCGAAATAGT GGGCGAGGCG CGCAATGGAA AGCAGGCGTT AGACGTTATT CAGGATGTAC AACCCGATTT AGTGTTTTTA GATATTCAAA TGCCGGTGTT AACGGGGTTT GAAGTGTTGA AAGCACTGCA AGGCGATACC TTGCCGCTAA TCGTATTTAC CACCGCTTAC GAAGAGTATG CCGTGCAGGC GTTCGACTTG CACGCCGTAG ACTACCTATT AAAGCCCTTT AGCGAAGAGC GTTTAAATAA AGCGCTAGCC CGGGTAATGG AACGCTGGCA ACTGGCCGAA GAAGATCAAA AAGGCACACT GTTACAAGCG GTGGAATTTA TTCTAAATAA AGGCGAGGGG CCGTCGGTTA GCGCAGGTGC AGAGCCTAAA TTAGCCATTA AAGAGTCCGG CGAGGTACTG TTAATTCCGC AAACAGAAAT TGATTGGGTC GATGCAGCGG GTGATTACAT GTGCATTCAC TCCAAAGGGC AAACTCATAT ACAGCGCTGC ACAATGAAGC AGTTGCTAGA AAAACTAGAT AGCCGCCGCT TTTGCAGAAT CCACCGCTCC ACCGTTGTGA ATGTGGATCG CATTACCAAA GTAATTCCAC ACACCAAAGG CGAAAGTTTT TTAATGTTAG ATTGCGGCGA AAAATTAAAA GTAAGCCGCA ATTGTCGCGA AGCTATTCAG CAATTTTTAG CATCGTAA
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Protein sequence | MSEPKLPSLR TVIVEDEPIA MLQMKSMLQG CPTIEIVGEA RNGKQALDVI QDVQPDLVFL DIQMPVLTGF EVLKALQGDT LPLIVFTTAY EEYAVQAFDL HAVDYLLKPF SEERLNKALA RVMERWQLAE EDQKGTLLQA VEFILNKGEG PSVSAGAEPK LAIKESGEVL LIPQTEIDWV DAAGDYMCIH SKGQTHIQRC TMKQLLEKLD SRRFCRIHRS TVVNVDRITK VIPHTKGESF LMLDCGEKLK VSRNCREAIQ QFLAS
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