Gene Sbal223_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2685 
Symbol 
ID7089970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3152738 
End bp3153448 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID643461574 
Productputative two-component response-regulatory protein YehT 
Protein accessionYP_002358598 
Protein GI217973847 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0538398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000367908 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCACTT GTTTAATTGT CGATGATGAA CTGTTTGCTC GTGAAGAATT AGCCGATCTT 
TTGGGGCAAG AACACGACAT TGAAATTGTT GGTCAATGCG CTAATGCCAT CGAGGCGTTG
CAAAGCATAG CCAAAGAAAA ACCTCAGTTA ATTTTTCTCG ATATCCAAAT GCCGCGCATT
TCGGGCATGG AACTTATCGC TATGCTCGAC CCCGATAACA TGCCAAAAAT TGTGTTTGTT
ACCGCTTACG ACGAATTTGC CGTCAAGGCC TTCGACAACC ATGCCTTCGA TTATTTGCTC
AAACCGATAG ATGCCGAGAG ACTCAGTAAA ACCCTCACTC GGGTGCGTAA AAATCTGACG
CCTCAAATTA TGGATCCCAT TACCCCAAAG CGTCTGGAAC ATATTCCCTG TTACAGCGGC
AATAAACTCA AGGTGATTGC AATCCAAGAT GTGGAATATG TGTTCAGTGA TTTGAGCGGC
ATCCATGTGG CCAGTACGAA AGGCAAAGTC CATACCCAAT TGACCTTAAA AGTGTTTGAA
GAAAAAACCC CACTGGTGCG CTGCCATCGG CAGTATTTGA TTTCACCTAA GGCGATTGCC
GAAATTGAGC TGTTAGACAC GGGCGCCGAA GTCACCACCC ATTCGGGGGA TAAAGTGCCC
GTATCACGGC GTTATCTTAA GAGCCTTAAA CAGCTGTTCG GCTTCCAATA A
 
Protein sequence
MITCLIVDDE LFAREELADL LGQEHDIEIV GQCANAIEAL QSIAKEKPQL IFLDIQMPRI 
SGMELIAMLD PDNMPKIVFV TAYDEFAVKA FDNHAFDYLL KPIDAERLSK TLTRVRKNLT
PQIMDPITPK RLEHIPCYSG NKLKVIAIQD VEYVFSDLSG IHVASTKGKV HTQLTLKVFE
EKTPLVRCHR QYLISPKAIA EIELLDTGAE VTTHSGDKVP VSRRYLKSLK QLFGFQ