| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4846 |
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| Symbol | |
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| ID | 6119223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5835975 |
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| End bp | 5836715 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641636427 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001763190 |
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| Protein GI | 170729164 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.568582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG TACTAATCGT TGACGATGAG TATTTAGCTC GCTTAGAGCT AACCCGTCTA
TTAAGTAAGT ATGTCGATAT TGAAATTGTT GGCGAGGCGG AAGATGGACA TCAGGCACTA
GAACTATTAA AAAAAACCTC TGTTGATTTA GCCTTTGTTG ATATACAGAT GCCGGAGATG
GATGGCCTTG AGTTTGCTAA GCAGGCTGAG TCTCAGCAGT TTCAGTTAGT TTTTTGTACC
GCATTTAGTG AGCATGCGGT AGATGCGTTT GAGCTGAATG CATTTGATTA TATTGTTAAA
CCAATTATGC CTGAGCGGCT AGAGGCTGTA TTAAATAAAG TCCGTCTTAT ACAGGAAACC
CATGATGAGA CTGAACAGGA TGATATTCAG TGCTTACCAG ATAATCATGG CCTGTTATTG
AAGTTTGGTT CCGATTATAA GATTGTCAGA ATCAATGAAA TTTGCCGTTT TGAGTCTTTG
GGAAATCATG TGGCTGTTTA CTCTGATTCA GGTAAATCTT ACCTCCATAT CTCACTCTCT
AAAGTAGAGA AGAAGCTTGA TCCCGCAGTT TTTTTTAAAG CCAGTCGTAG CGATATTGTC
CGTGTTGATC AAATTGACAA AATTGAGGAG GGAATGGCAT CTGGAAGCTT GCAGGTGCAT
ATGAACAATG GGCAAGAGAT CGATGTTAGT CGAAGACAGG TTCAGCTATT ACGTAAGATA
TTTAGTATCG ATAGTTTCTG A
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| Protein sequence | MLKVLIVDDE YLARLELTRL LSKYVDIEIV GEAEDGHQAL ELLKKTSVDL AFVDIQMPEM
DGLEFAKQAE SQQFQLVFCT AFSEHAVDAF ELNAFDYIVK PIMPERLEAV LNKVRLIQET
HDETEQDDIQ CLPDNHGLLL KFGSDYKIVR INEICRFESL GNHVAVYSDS GKSYLHISLS
KVEKKLDPAV FFKASRSDIV RVDQIDKIEE GMASGSLQVH MNNGQEIDVS RRQVQLLRKI
FSIDSF
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