| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6007 |
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| Symbol | algR |
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| ID | 5355640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6204660 |
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| End bp | 6205406 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640815051 |
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| Product | alginate biosynthesis regulatory protein AlgR |
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| Protein accession | YP_001351323 |
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| Protein GI | 152989087 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.404994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTCC TGATTGTCGA TGACGAACCT CTGGCGCGAG AGCGCCTGGC CCGATTGGTA
GGGCAACTGG ACGGCTATCG CGTCCTCGAG CCCTCGGCCA GCAATGGCGA AGAAGCGCTG
ACGCTGATCG ACAGCCTCAA GCCCGATATC GTCCTGCTGG ATATCCGCAT GCCCGGTCTG
GACGGCCTCC AGGTCGCGGC CAGACTCTGC GAGCGGGAAG CCCCGCCCGC GGTGATCTTC
TGCACGGCCC ATGACGAATT CGCCCTGGAA GCCTTCCAGG TCAGCGCCGT GGGCTATCTG
GTCAAGCCGG TGCGCAGCGA GGACCTGGCC GAAGCGCTGA AGAAGGCCTC GCGGCCGAAC
CGCGTGCAGC TGGCCGCGCT GACCAAGCCT CCGGCCGCCG GTGGCAGCGG ACCGCGCAGC
CACATCAGCG CGCGGACCCG CAAGGGGATC GAACTGATCC CCCTGGAGGA CGTGATCTTC
TTCATTGCCG ACCACAAGTA CGTGACCCTG CGCCATGCGC AGGGCGAAGT GCTGCTGGAC
GAGCCGTTGA AGGCTCTGGA GGACGAGTTC GGCGAACGCT TCGTGCGTAT CCACCGCAAC
GCCCTGGTCG CCCGCGAACG GATCGAACGC CTACAGCGTA CGCCGCTGGG GCATTTCCAG
CTCTATCTGA AAGGACTCGA TGGCGATGCG CTGACCGTCA GCCGACGGCA CGTGGCCGGC
GTCAGGCGCC TGATGCACCA GCTCTGA
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| Protein sequence | MNVLIVDDEP LARERLARLV GQLDGYRVLE PSASNGEEAL TLIDSLKPDI VLLDIRMPGL
DGLQVAARLC EREAPPAVIF CTAHDEFALE AFQVSAVGYL VKPVRSEDLA EALKKASRPN
RVQLAALTKP PAAGGSGPRS HISARTRKGI ELIPLEDVIF FIADHKYVTL RHAQGEVLLD
EPLKALEDEF GERFVRIHRN ALVARERIER LQRTPLGHFQ LYLKGLDGDA LTVSRRHVAG
VRRLMHQL
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