| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2883 |
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| Symbol | |
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| ID | 5613358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3487468 |
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| End bp | 3488178 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933802 |
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| Product | putative two-component response-regulatory protein YehT |
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| Protein accession | YP_001474618 |
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| Protein GI | 157376018 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000903631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000401288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGATCACAT CACTAATTAT CGATGATGAG CTTTTTGCTC GAGAAGAGTT AGCCGACCTA
CTGAGTGAAA GCTCAGACAT AGAGATCATC GGCCAATGCA GTAATGCTAT CGAAGCATTG
CAGATGATCA CAAAACTTAA GCCTCAGTTG ATCTTCCTGG ACATCCAGAT GCCGAGGATC
ACAGGTATTG AACTCATTGG CATGCTGGAT CCTGACATAA TGCCGCGTAT CGTTTTCGTT
ACCGCCTACG ATGAATTTGC CATCAAGGCA TTCGATAATT ACGCCTTCGA TTATCTGTTA
AAGCCTATCG ATGAAAAAAG GCTTCAACAG ACATTAAATC GGGTCAGAAA AGATTTTCAA
CCAAAATCTG TCAGCATCAT TGCGCCAGAG CAGTTAACTC ACCTCCCCTG CTATACCGGA
AGTAAGCTTA AGGTGATATC GATTAAAGAG GTTGAGTTTG TATTCAGCGA TCTCAGTGGT
GTTCATGTTG CGACCAATAG GGAACAAGCA CATACCCACT TAACCCTGAA AGTGCTGGAA
GAGAAAACCT CGTTGATCAA ATGCCATCGA CAATACCTGA TAAGCCCTGA AGCAATATCT
GAAATAGAGG TCCAGGAAAC CGGCGCCGAA GTCACCACAG TCTCCGGCGC TAAAGTTCCT
GTTTCGAGGC GTTACTTAAA GCCACTGAAG CAGATGTTTG GTTTTTTATA A
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| Protein sequence | MITSLIIDDE LFAREELADL LSESSDIEII GQCSNAIEAL QMITKLKPQL IFLDIQMPRI
TGIELIGMLD PDIMPRIVFV TAYDEFAIKA FDNYAFDYLL KPIDEKRLQQ TLNRVRKDFQ
PKSVSIIAPE QLTHLPCYTG SKLKVISIKE VEFVFSDLSG VHVATNREQA HTHLTLKVLE
EKTSLIKCHR QYLISPEAIS EIEVQETGAE VTTVSGAKVP VSRRYLKPLK QMFGFL
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