Gene Dtox_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0388 
Symbol 
ID8427323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp402266 
End bp402967 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content37% 
IMG OID645032778 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_003189956 
Protein GI258513734 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAA TTATTGCCGA AGACAATCCG GTAGAGATGA GATATTTAAA GAATCTGTTA 
AGCCGGGAAA GTGACATAGA AATAATCGGA GAGGTTTCAG ATGGTTGGGA AGCCACGAAA
ATGATATCAA AACTGCAACC TGAAGTAGCC TTTCTGGATA TATCTATGCC GGGAATTTCA
GGGATGGACT TAGTGAGGAA ATTTGACGGT AGAGTTATTA TTGTCTTAGT AACAGCTCAT
CATGAATATG CACTGGATGC TTTCGAAGCC GGTTCCATGG ATTACCTGCT AAAACCAGTT
GAGCCGGAAA GAGTAAGCCT TACTATAAGG CGACTTAGGA AAATATTATC TCGCAAAACA
AGATATTCGG GAAGAATAAA TATCAATACT AAGGACTCAA TAATTGCCGT TGAGATAGAC
AGTATTATTT TTATTGAAAA GGTTCCACTT GCAAAAAAGA TAAAAATTCA AACAGTAAAT
AATGAATACA TCGTGTCCGG AACATTAAAC GAGTTTGAAG ATAAACTGAA AAGCCTAGGT
TTTATCAGAA CTCATAAAAG TTTTATTATA AACCCAGATA AATTAGAGAA AATGATTCCC
TGGGGTGATA AATCATATCT GGCCAAAATG CATGGTGTAA AGAAGGAAGC TCTTGTTAGC
CGAAAATATG CGGGGATGGT TAAGTCAGCA ATTAAATGGT AG
 
Protein sequence
MRVIIAEDNP VEMRYLKNLL SRESDIEIIG EVSDGWEATK MISKLQPEVA FLDISMPGIS 
GMDLVRKFDG RVIIVLVTAH HEYALDAFEA GSMDYLLKPV EPERVSLTIR RLRKILSRKT
RYSGRININT KDSIIAVEID SIIFIEKVPL AKKIKIQTVN NEYIVSGTLN EFEDKLKSLG
FIRTHKSFII NPDKLEKMIP WGDKSYLAKM HGVKKEALVS RKYAGMVKSA IKW