Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0579 |
Symbol | |
ID | 5090885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 616561 |
End bp | 617280 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739978 |
Product | response regulator receiver protein |
Protein accession | YP_001192933 |
Protein GI | 146298342 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATACAA AACTGAAATG CTTGCTTCTG GACGATGAAC TTCCGGGATT GACTTATTTA AAAATGCTTT GTGAACAAAT TCCTGAACTG GAAATTGTAA AAACATTTAA TAATCCTGAG AAACTTTTGT CTGATATTCC AGATCTGGAT TTTGATCTCT TAATTTCTGA TATCGAAATG CCGGGAATGG ACGGCCTGCA TCTAGCCGAA ATACTCGAGA ATAAATTAGT GATTTTTTGT ACGGCTTATA AAGATTACGC TGCCGATGCT TTTAATATTG ATGCTGTAGA TTATATCACA AAACCTGTAA AATTAGAACG TCTTCAAAAA GCGGTTTCCA AAGCTTTTGA GCGTTTCGAT AAAACTGATA ATTCAAAAAA GTTTATTCAG CTCAATACAG ACAAAGGAAA AACGCTGCTA TATTTTAATA AAATCCAATA TATTACAACA GCATCAAGTG ACAGTCGGGA TAAAACGGTT TTGCTTGCAG ATGGAAGTTT ACTGAATTTG AAAAACGTAA AATTTGATAC GCTTTTACAA GAATTACCAG ATGCTGATTT CTGCAGAATC AATAAAAAAG AAATTGTTGC GGTAAAGGCG ATAAAATTCT TTAACCATAA CGAAATTGTG CTTCATCATC TAGAAGAAAA TAATAAAAAT ACATCTCTAA TTCTGAGCGA AACGTATCGT TCTGATTTTT TGAAAAAGGT AAAATTATAA
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Protein sequence | MNTKLKCLLL DDELPGLTYL KMLCEQIPEL EIVKTFNNPE KLLSDIPDLD FDLLISDIEM PGMDGLHLAE ILENKLVIFC TAYKDYAADA FNIDAVDYIT KPVKLERLQK AVSKAFERFD KTDNSKKFIQ LNTDKGKTLL YFNKIQYITT ASSDSRDKTV LLADGSLLNL KNVKFDTLLQ ELPDADFCRI NKKEIVAVKA IKFFNHNEIV LHHLEENNKN TSLILSETYR SDFLKKVKL
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