| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5300 |
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| Symbol | |
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| ID | 8228911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6397206 |
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| End bp | 6397931 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933145 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003089658 |
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| Protein GI | 255039037 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0290142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGA ACTGCATTAC CGTCGACGAC GAACCTCTGG CGCTCAACCT GATCAGCGCA
TTCTCGGAGC AAACGCCTTT TCTGGAATTG AAGGGCAGGT TTGGGAATGC CGTGGAAGCA
TTGCAGGCGC TGCATGAGCA AACGATCCAT CTCATTTTCC TGGATATTCA GATGCCGGAC
CTGAACGGCA TGGAGCTTGC GCGGGTGATC AGCCAGGCGG GAGCGTCGCT GCAAACGCGC
ATCGTTTTCA CGACGGCCTA CAACCAGTTT GCCGTGGAAG GTTACAAGGT GGATGCGCTG
GACTATCTGC TGAAACCTTT CGGCTATGAC GAATTTCTGC GTGCGGCCAC CAAGGCAAAG
CGGTATTTCG AGGTGTTGCA GGACAATGGG GCGGGCGACG CTACGGAGAA TTATATGTTT
ATTAAATCGG ATTACAAGCA CATCCGGGTG GATTTTGATT CCGTGACGCA CATAGAGTCC
GTGAAGGATT ATGTGAAAAT CCATTTGATG CCGCCCCTGA GCCCGGTGGT GACTTTGAGC
AGTCTCAAAT CCATTGAAGA GAAACTGCCG GCCGCACGGT TCCTGCGCAT TCACCGCTCG
TTCATCGTCG CGGTGAGCAA AGTCGATTCC GTCAGCAAAA ACGCCGTCCA ACTCGGCCTG
GTTGAAATTC CGGTGGGCGA GCTGTACAAG GAAGCCTTCA AAACGCTGCT GGCGCGCTGG
ATGTAA
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| Protein sequence | MKLNCITVDD EPLALNLISA FSEQTPFLEL KGRFGNAVEA LQALHEQTIH LIFLDIQMPD
LNGMELARVI SQAGASLQTR IVFTTAYNQF AVEGYKVDAL DYLLKPFGYD EFLRAATKAK
RYFEVLQDNG AGDATENYMF IKSDYKHIRV DFDSVTHIES VKDYVKIHLM PPLSPVVTLS
SLKSIEEKLP AARFLRIHRS FIVAVSKVDS VSKNAVQLGL VEIPVGELYK EAFKTLLARW
M
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