| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1227 |
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| Symbol | |
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| ID | 6287194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1315178 |
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| End bp | 1316011 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624797 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_001898803 |
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| Protein GI | 187928316 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.299238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.813842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTT CCCCACGCTT GCTGATTGCC GACGACGAAC CGGCACTGGC TGAGAACCTC
GTCGCTGAAC TGGCGGCGCT ATGGCCCGAG GCCACGTTGC TGCCGGCCGT GCACGATGGG
CAATCCGCGC TCGACGTGGT TGACGACGCG GCCGACGGGC AGGCGCCCGA TGTGGTCTTT
CTCGACATCC GCATGCCGGG GTTGTCGGGC ATTGACGTGG CGCGCGAGCT GTCGGATCGG
GAAGACCGTC CGCTGGTGGT GTTCGTGACC GCGTATGACC AGTTCGCGCT CGATGCCTTC
GAGCAGGCCG CGGTCGACTA CGTGCTCAAG CCCGTGCAGA CCGAGCGCCT GGCCGAGACC
ATCAAGCGGC TGAAGGACCG GCTCGGCACG CGCCCGAACG GCAACGCCAG CGCCGCTGCC
ACGGACCCCG CGCAGACGCT GGCGGAACTC GTCGAGCGTC TTGCCGGCCT GCAGGGCGCT
GCGCAAACGC GTGCCACGCC GCAGGGCGGC TATCTGCGCT TTATCAAGGC GCTGGTCGGG
CAGGAGGTGC GCTTCATCCC CGTGGATGAC GTGATCTATC TGGAAGCGAC CGACAAGTAC
GTCAACGTGG TTTCGGCCAG CGGAGAATCC CTCATCCGCA CCAGCCTGCG TGACCTGCTG
ACCCAGCTCG ACCCCGAGCA CTTCTGGCAG GTGCATCGCG GTACGGTGGT CAACGTGGCG
CATGTGTCGA GCGCGGTGCA TCTGTCGCTG GGCCGCCTGG GGCTGAAAAT CCGCGGGCGC
ACCGAGACGC TGCCCGTCGC GCGGCAATAC GCACATTTGT TCCGCCAGAT GTAG
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| Protein sequence | MPASPRLLIA DDEPALAENL VAELAALWPE ATLLPAVHDG QSALDVVDDA ADGQAPDVVF
LDIRMPGLSG IDVARELSDR EDRPLVVFVT AYDQFALDAF EQAAVDYVLK PVQTERLAET
IKRLKDRLGT RPNGNASAAA TDPAQTLAEL VERLAGLQGA AQTRATPQGG YLRFIKALVG
QEVRFIPVDD VIYLEATDKY VNVVSASGES LIRTSLRDLL TQLDPEHFWQ VHRGTVVNVA
HVSSAVHLSL GRLGLKIRGR TETLPVARQY AHLFRQM
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