More than 300 homologs were found in PanDaTox collection
for query gene BURPS1106A_A1373 on replicon NC_009078
Organism: Burkholderia pseudomallei 1106a



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009078  BURPS1106A_A1373  DNA-binding response regulator  100 
 
 		 300 aa  572  1.0000000000000001e-162  Burkholderia pseudomallei 1106a  Bacteria  normal  0.648551  n/a   
 
 
-
 
NC_007650  BTH_II1400  response regulator  97.5 
 
 		 243 aa  239  4e-62  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2603  response regulator  94.78 
 
 		 243 aa  221  9.999999999999999e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1458  DNA-binding response regulator  94.78 
 
 		 140 aa  221  9.999999999999999e-57  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C6684  LytR/AlgR family transcriptional regulator  76.92 
 
 		 243 aa  213  3.9999999999999995e-54  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008784  BMASAVP1_0193  response regulator  97.59 
 
 		 108 aa  166  4e-40  Burkholderia mallei SAVP1  Bacteria  normal  0.673566  n/a   
 
 
-
 
NC_008835  BMA10229_0469  alginate biosynthesis regulatory protein  97.59 
 
 		 108 aa  166  4e-40  Burkholderia mallei NCTC 10229  Bacteria  normal  0.901816  n/a   
 
 
-
 
NC_009483  Gura_2443  LytTR family two component transcriptional regulator  58.77 
 
 		 279 aa  135  9.999999999999999e-31  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_07024  transcriptional regulator  56.88 
 
 		 263 aa  127  2.0000000000000002e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_0421  two component transcriptional regulator, LytTR family  58.93 
 
 		 256 aa  126  4.0000000000000003e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.268274 
 
 
-
 
NC_013457  VEA_000974  response regulator of the LytR/AlgR family  56.88 
 
 		 263 aa  126  4.0000000000000003e-28  Vibrio sp. Ex25  Bacteria  normal  0.728867  n/a   
 
 
-
 
NC_009456  VC0395_0387  response regulator  55.56 
 
 		 261 aa  125  1e-27  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_1381  LytR/AlgR family transcriptional regulator  52.14 
 
 		 273 aa  117  3e-25  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.557466 
 
 
-
 
NC_007347  Reut_A1965  response regulator receiver:LytTr DNA-binding region  48.72 
 
 		 273 aa  111  1.0000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.864475  n/a   
 
 
-
 
NC_012856  Rpic12D_1290  two component transcriptional regulator, LytTR family  43.21 
 
 		 277 aa  107  3e-22  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.212023 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  41.91 
 
 		 237 aa  107  3e-22  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_2282  response regulator receiver protein  45.67 
 
 		 276 aa  105  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.81  normal  1 
 
 
-
 
NC_010682  Rpic_1227  two component transcriptional regulator, LytTR family  44.14 
 
 		 277 aa  104  2e-21  Ralstonia pickettii 12J  Bacteria  normal  0.299238  normal  0.813842 
 
 
-
 
NC_008752  Aave_2035  response regulator receiver protein  46.72 
 
 		 282 aa  103  5e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  0.150352  normal  1 
 
 
-
 
NC_010717  PXO_03033  transcriptional regulator protein  49.53 
 
 		 165 aa  103  5e-21  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1479  putative two-component response-regulatory protein YehT  44.92 
 
 		 236 aa  102  6e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0100477  n/a   
 
 
-
 
NC_010002  Daci_2262  LytTR family two component transcriptional regulator  49.17 
 
 		 269 aa  102  6e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.192742  normal  0.0894174 
 
 
-
 
NC_011312  VSAL_I1318  putative two-component response-regulatory protein YehT  40.71 
 
 		 238 aa  101  1e-20  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3613  two component transcriptional regulator, LytTR family  46.34 
 
 		 281 aa  101  1e-20  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3341  putative two-component response-regulatory protein YehT  42.22 
 
 		 244 aa  102  1e-20  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.798853 
 
 
-
 
NC_009675  Anae109_3416  putative two-component response-regulatory protein YehT  48.31 
 
 		 237 aa  102  1e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.329348  normal  0.0577965 
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  45 
 
 		 239 aa  100  3e-20  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00984  putative two-component response-regulatory protein YehT  44.92 
 
 		 242 aa  100  3e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2329  putative two-component response-regulatory protein YehT  44.07 
 
 		 236 aa  100  3e-20  Shewanella loihica PV-4  Bacteria  normal  0.0108361  normal  0.9097 
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  48.31 
 
 		 238 aa  100  4e-20  Yersinia pestis Angola  Bacteria  normal  1  normal  0.159726 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  48.31 
 
 		 238 aa  100  4e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  48.31 
 
 		 238 aa  100  4e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_004414  response regulator of the LytR/AlgR family  44.92 
 
 		 242 aa  99.4  6e-20  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_02054  predicted response regulator in two-component system withYehU  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_1533  two component transcriptional regulator, LytTR family  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli DH1  Bacteria  normal  0.726215  n/a   
 
 
-
 
NC_010498  EcSMS35_0919  putative two-component response-regulatory protein YehT  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012892  B21_02012  hypothetical protein  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A2259  putative two-component response-regulatory protein YehT  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_3112  putative two-component response-regulatory protein YehT  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.148941 
 
 
-
 
NC_011992  Dtpsy_1069  two component transcriptional regulator, LytTR family  46.34 
 
 		 276 aa  97.4  2e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.257927  n/a   
 
 
-
 
NC_009831  Ssed_2883  putative two-component response-regulatory protein YehT  34.3 
 
 		 236 aa  97.8  2e-19  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000903631  unclonable  0.0000000000401288 
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  36.51 
 
 		 241 aa  97.8  2e-19  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  44.17 
 
 		 239 aa  97.4  2e-19  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2452  putative two-component response-regulatory protein YehT  43.18 
 
 		 238 aa  97.1  3e-19  Rhodoferax ferrireducens T118  Bacteria  normal  0.0310324  n/a   
 
 
-
 
NC_014230  CA2559_04910  two-component system response regulator  43.59 
 
 		 236 aa  97.1  4e-19  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.981835  n/a   
 
 
-
 
NC_003295  RSc1352  two-component response regulator transcription regulator protein  46.04 
 
 		 270 aa  96.3  5e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_1083  putative two-component response-regulatory protein YehT  44.92 
 
 		 239 aa  96.7  5e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.450563  normal  1 
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  44.07 
 
 		 241 aa  95.9  7e-19  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_013061  Phep_1542  LytTr DNA-binding region  42.61 
 
 		 245 aa  95.9  8e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.300206 
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  43.97 
 
 		 239 aa  95.1  1e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  43.97 
 
 		 239 aa  95.1  1e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  43.97 
 
 		 239 aa  95.1  1e-18  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_1841  response regulator receiver  46.02 
 
 		 245 aa  95.5  1e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  1  hitchhiker  0.0000216203 
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  43.97 
 
 		 239 aa  95.1  1e-18  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  43.97 
 
 		 239 aa  95.1  1e-18  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal  1 
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  43.07 
 
 		 252 aa  95.5  1e-18  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_1548  putative two-component response-regulatory protein YehT  34.86 
 
 		 236 aa  95.1  1e-18  Shewanella putrefaciens CN-32  Bacteria  normal  0.496368  n/a   
 
 
-
 
NC_009675  Anae109_1440  putative two-component response-regulatory protein YehT  49.15 
 
 		 236 aa  94.4  2e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_1281  putative two-component response-regulatory protein YehT  46.79 
 
 		 236 aa  94.4  2e-18  Shewanella amazonensis SB2B  Bacteria  normal  0.155887  normal  0.0159688 
 
 
-
 
NC_009665  Shew185_0055  LytTR family two component transcriptional regulator  41.32 
 
 		 243 aa  94.7  2e-18  Shewanella baltica OS185  Bacteria  normal  0.868518  n/a   
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  41.67 
 
 		 239 aa  94.7  2e-18  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  42.42 
 
 		 260 aa  93.6  3e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal  1 
 
 
-
 
NC_007912  Sde_3900  response regulator receiver domain-containing protein  42.24 
 
 		 261 aa  94  3e-18  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_0059  two component transcriptional regulator, LytTR family  41.32 
 
 		 243 aa  93.6  3e-18  Shewanella baltica OS223  Bacteria  normal  0.182784  normal  1 
 
 
-
 
NC_009997  Sbal195_0060  LytTR family two component transcriptional regulator  41.32 
 
 		 243 aa  93.2  5e-18  Shewanella baltica OS195  Bacteria  normal  0.0478076  hitchhiker  0.000497336 
 
 
-
 
NC_009052  Sbal_4299  LytTR family two component transcriptional regulator  41.32 
 
 		 243 aa  93.2  5e-18  Shewanella baltica OS155  Bacteria  decreased coverage  0.000001386  n/a   
 
 
-
 
NC_008345  Sfri_2434  putative two-component response-regulatory protein YehT  37.4 
 
 		 236 aa  92.4  7e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.318628  n/a   
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  39.82 
 
 		 246 aa  92.4  8e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal  1 
 
 
-
 
NC_003910  CPS_1819  LytTr DNA-binding response regulator  41.59 
 
 		 260 aa  92.4  9e-18  Colwellia psychrerythraea 34H  Bacteria  normal  0.148301  n/a   
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  39.66 
 
 		 257 aa  92  1e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1151  response regulator receiver protein  43.7 
 
 		 276 aa  91.7  1e-17  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_4382  LytTR family two component transcriptional regulator  44.07 
 
 		 273 aa  92  1e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_1695  putative two-component response-regulatory protein YehT  41.18 
 
 		 236 aa  90.9  2e-17  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal  1 
 
 
-
 
NC_010506  Swoo_1765  putative two-component response-regulatory protein YehT  41.23 
 
 		 232 aa  91.3  2e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  0.199181  hitchhiker  0.00544661 
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  36.73 
 
 		 244 aa  90.9  2e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal  1 
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  43.81 
 
 		 253 aa  90.9  2e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal  1 
 
 
-
 
NC_008228  Patl_2385  response regulator receiver protein  34.87 
 
 		 272 aa  91.3  2e-17  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_0057  response regulator receiver protein  40.5 
 
 		 243 aa  91.3  2e-17  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000048418  decreased coverage  0.0000000648872 
 
 
-
 
NC_008322  Shewmr7_0055  response regulator receiver protein  40.5 
 
 		 243 aa  91.3  2e-17  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000989316  hitchhiker  0.000468323 
 
 
-
 
NC_011663  Sbal223_2685  putative two-component response-regulatory protein YehT  41.18 
 
 		 236 aa  90.9  2e-17  Shewanella baltica OS223  Bacteria  normal  0.0538398  hitchhiker  0.000367908 
 
 
-
 
NC_009052  Sbal_1673  putative two-component response-regulatory protein YehT  41.18 
 
 		 236 aa  90.9  2e-17  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000537167  n/a   
 
 
-
 
NC_009665  Shew185_1658  putative two-component response-regulatory protein YehT  41.18 
 
 		 236 aa  90.9  2e-17  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000153786  n/a   
 
 
-
 
NC_004347  SO_2823  putative two-component response-regulatory protein YehT  39.2 
 
 		 236 aa  90.5  3e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  49.53 
 
 		 255 aa  90.5  3e-17  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  40.52 
 
 		 251 aa  90.1  4e-17  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_2432  putative two-component response-regulatory protein YehT  44.04 
 
 		 236 aa  90.1  4e-17  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000158974  hitchhiker  0.00361478 
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  35.76 
 
 		 275 aa  89.7  5e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_013132  Cpin_3790  two component transcriptional regulator, LytTR family  37.84 
 
 		 240 aa  89.4  6e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.540237  normal  0.0384587 
 
 
-
 
NC_008322  Shewmr7_2502  putative two-component response-regulatory protein YehT  43.12 
 
 		 236 aa  89.4  6e-17  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00178929  normal  0.0452702 
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  42.62 
 
 		 238 aa  89.4  7e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1614  response regulator receiver and SARP domain protein  45.83 
 
 		 376 aa  89.4  7e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.401218  n/a   
 
 
-
 
NC_008577  Shewana3_2594  putative two-component response-regulatory protein YehT  43.12 
 
 		 236 aa  89.4  7e-17  Shewanella sp. ANA-3  Bacteria  normal  0.0103906  hitchhiker  0.00157605 
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  43.44 
 
 		 248 aa  88.2  1e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3679  LytR/AlgR family transcriptional regulator  38.93 
 
 		 262 aa  88.6  1e-16  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_3170  putative two-component response-regulatory protein YehT  50.96 
 
 		 239 aa  88.2  1e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_4386  two component transcriptional regulator, LytTR family  37.21 
 
 		 260 aa  88.2  1e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_0495  response regulator receiver and SARP domain protein  37.33 
 
 		 365 aa  88.6  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000108458  n/a   
 
 
-
 
NC_012917  PC1_3149  putative two-component response-regulatory protein YehT  43.7 
 
 		 238 aa  88.2  1e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  43.1 
 
 		 252 aa  87.8  2e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
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