Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2282 |
Symbol | |
ID | 4690558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2587607 |
End bp | 2588437 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850049 |
Product | response regulator receiver protein |
Protein accession | YP_997048 |
Protein GI | 121609241 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.81 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGC CCGCCCCGCG CGCATTGATT GCCGAAGACG AGCCCCTGCT GGCCGCCGCG TTGCAGCAAG AGCTCAGCCG CGCCTGGCCC GGGTTGCAAA TCGTCGCCAC CGTGGGCGAT GGGCTGTCGG CCGTGCGCCA GGCGCTGGCA TTGCAACCCG AGTTGCTGTT CTTCGACATC CGCATGCCCG GCCAAAGCGG GCTCGACGCC GCCGTGGAAC TGGCCGAGGA CTGGCCCGGC ACAGGCCCGT CCGCGCGCCC GTTTCCGGCG CTGGTGTTCG TGACGGCCTA CGACCAGTAC GCCGTGCAGG CTTTTGAAGC GCAGGCCATC GACTACCTGC TCAAGCCAAT ACAGCCGGCG CGGCTGCAAA AAACAGTGCA AAAACTACAG CAGGCGCTCG CCAATCACGC GCCTTACGCT ATTGATTTGG AGGCCACCAT GGCGCAACTG CGCCATCTGC TGGCAGCGCC GGGTGTCGTG CCGGGCAGCA GCGCATCTTC CGGCGCAGCG CTGACGCTGA TTCCGGCCAG CAGCGGCAAC CGCGTCCATA TGGTGCCCGT GGCCGAGGTG CTGTATTTCG AGGCCGCAGA CAAGTACGTG CGCGTGCTCA CGGCGGCGCG CGAATTCCTG ATCCGCACCC CGCTCAAGGA ACTGATCGCC CAGCTCGATC AGCGGGTGTT CTGGCAGATC CACCGCAGCA CCCTGGTGCG TGCCGACGCC ATCACCACCG TGACGCGCGA CGAAGCCGGC AAGCTGCACC TGGAATTGAC CGGTCGCCCC GAAAAGCTCC CCGTCAGCCG CCTCTACGCC CACCTGTTCA AGGCCATGTA G
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Protein sequence | MNQPAPRALI AEDEPLLAAA LQQELSRAWP GLQIVATVGD GLSAVRQALA LQPELLFFDI RMPGQSGLDA AVELAEDWPG TGPSARPFPA LVFVTAYDQY AVQAFEAQAI DYLLKPIQPA RLQKTVQKLQ QALANHAPYA IDLEATMAQL RHLLAAPGVV PGSSASSGAA LTLIPASSGN RVHMVPVAEV LYFEAADKYV RVLTAAREFL IRTPLKELIA QLDQRVFWQI HRSTLVRADA ITTVTRDEAG KLHLELTGRP EKLPVSRLYA HLFKAM
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