Gene Aave_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2035 
Symbol 
ID4665794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2216291 
End bp2217139 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID639823245 
Productresponse regulator receiver protein 
Protein accessionYP_970392 
Protein GI120610714 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.150352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC CCCGCGCCCT GATCGCCGAA GACGAACCGC TGCTGGCGCA AGCCCTGCGC 
CAGGAACTCG CGCGGGCCTG GCCCGGGCTG CAGATCGCCG CGACCGTCGG CGACGGCCGC
AGCGCGGTGC GCCAGGCGCT GGAACTGCGG CCGGACGTGC TCTGGTTCGA CATCCGCATG
CCCGGCCTCG GCGGGTTGGA GGCGGCACTG GAGCTGGCCG ATGCCTGGCC GCTCGACGCC
GCGCCGTTCC CCGCGCTGGT TTTCGTGACG GCCTACGACC AGTACGCGGT CGATGCCTTC
GAGGCGCAGG CGCTGGACTA CCTGCTCAAG CCCGTGCAGG CACCCCGGCT GCTCAAGACG
GTGCAGAAGA TCCAGGCGGT GCTGGCGGCC CGCGCCGCGC CGCACGCGGA CGCCGGCGGG
CAGGGCCCCT GCGTTCCGTC CCGGGACGAG GCCGGCCTGG AAGCCCTGCT GGAACGGCTG
CGCGGGCTGG TGCCGGGCAC GGCCGCGCCA TCGTCCGGGG CCGCGCCCCT GACCGTCATC
CAGGCCAGCA GCGGCCCGCG CATCCACTTC GTGCCCGTGG CGGACGTGCT GGTGTTCGAG
GCCGCGGACA AATACGTGCG CGTGCTCACC GCCCGGCAGG AATACCTCAT CCGCACGCCG
CTCAAGGAAC TCGCAGCGCA ACTGGAGCCC GATGTGTTCT GGCAGATCCA CCGCGGCACG
CTCGTGCGCG CGTCGGGCAT CGAATCGGTG GAGCGGGACG AGTCGGGGCG GCTGCACCTG
CGCCTGCGCG AGCGGCCCGA GCGCCTGCCC GTGAGCCGGT TGCACGCGCA CCGCTTCAAG
GCGATGTGA
 
Protein sequence
MHAPRALIAE DEPLLAQALR QELARAWPGL QIAATVGDGR SAVRQALELR PDVLWFDIRM 
PGLGGLEAAL ELADAWPLDA APFPALVFVT AYDQYAVDAF EAQALDYLLK PVQAPRLLKT
VQKIQAVLAA RAAPHADAGG QGPCVPSRDE AGLEALLERL RGLVPGTAAP SSGAAPLTVI
QASSGPRIHF VPVADVLVFE AADKYVRVLT ARQEYLIRTP LKELAAQLEP DVFWQIHRGT
LVRASGIESV ERDESGRLHL RLRERPERLP VSRLHAHRFK AM