| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1819 |
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| Symbol | |
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| ID | 3521507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1868979 |
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| End bp | 1869761 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284281 |
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| Product | LytTr DNA-binding response regulator |
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| Protein accession | YP_268549 |
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| Protein GI | 71281038 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.148301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAAC TCGCTCAAGT CTCTAGCTCG TACAAGGTAC TTGTTGTAGA TGATGAACCT
GCTGCACGTC AAAAGCTTAT TCACTTTCTA AAAGAACACA GTGATTTTGA CGTCGTTGCA
GAAGCAAGAA ATGGCGTGGA AGCACTAGAG TGCATTGATA AGTTTACCCC ATCATTGGTC
TTTTTAGATA TTCAAATGCC CAAACTGGAT GGCATTTCTG TCGCCAGTAA TTTAGAGTTT
AACAAAGAAG TTTCCATTGT ATTTGTGACT GGTTTTAATG AATATGCGAT AAGTGCATTT
GAGTTAAATG CGGTTGACTA TCTCCTTAAA CCCTATGACA AAGCTAGGTT AGCTAAAACA
CTTAATCGCT TTCGTGAATT TTCTGGAACA ACACAAAAAT TTGATATTCC AAAGCTTGTG
CAAGATTACC GAACAGACCA GCACTACCCA AAAACTTTAC TATTTAAAGC TGAAGGCTCA
ATTGAAGTAG CGAAAGCAGA TGAAGTTCAA TGGATTGAAT CTTCGGGTAA CTATGTAAAA
ATTTGCCTTG AAAGAACGGC ATTTATTGCC AGACAAACAT TAACTGGCGT ACAGAGTCAG
TTAGACCCCA CTATTTTTGT ACGCATACAC CGTTCGCACG TGATCAATAT TAATGAAGTT
ATTCAAGTGA CTCCCATTAG CAAAGGTGAT CATACCTTAC AGCTAAGATC AGGAACTGAA
CTAAGGTTAT CTCGAGCTTA CCAAGAGAAC TTCTTTAAGG TATTCAACCT TACCTCAATA
TAA
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| Protein sequence | MSELAQVSSS YKVLVVDDEP AARQKLIHFL KEHSDFDVVA EARNGVEALE CIDKFTPSLV
FLDIQMPKLD GISVASNLEF NKEVSIVFVT GFNEYAISAF ELNAVDYLLK PYDKARLAKT
LNRFREFSGT TQKFDIPKLV QDYRTDQHYP KTLLFKAEGS IEVAKADEVQ WIESSGNYVK
ICLERTAFIA RQTLTGVQSQ LDPTIFVRIH RSHVININEV IQVTPISKGD HTLQLRSGTE
LRLSRAYQEN FFKVFNLTSI
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