Gene CPS_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1819 
Symbol 
ID3521507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1868979 
End bp1869761 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content38% 
IMG OID637284281 
ProductLytTr DNA-binding response regulator 
Protein accessionYP_268549 
Protein GI71281038 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAC TCGCTCAAGT CTCTAGCTCG TACAAGGTAC TTGTTGTAGA TGATGAACCT 
GCTGCACGTC AAAAGCTTAT TCACTTTCTA AAAGAACACA GTGATTTTGA CGTCGTTGCA
GAAGCAAGAA ATGGCGTGGA AGCACTAGAG TGCATTGATA AGTTTACCCC ATCATTGGTC
TTTTTAGATA TTCAAATGCC CAAACTGGAT GGCATTTCTG TCGCCAGTAA TTTAGAGTTT
AACAAAGAAG TTTCCATTGT ATTTGTGACT GGTTTTAATG AATATGCGAT AAGTGCATTT
GAGTTAAATG CGGTTGACTA TCTCCTTAAA CCCTATGACA AAGCTAGGTT AGCTAAAACA
CTTAATCGCT TTCGTGAATT TTCTGGAACA ACACAAAAAT TTGATATTCC AAAGCTTGTG
CAAGATTACC GAACAGACCA GCACTACCCA AAAACTTTAC TATTTAAAGC TGAAGGCTCA
ATTGAAGTAG CGAAAGCAGA TGAAGTTCAA TGGATTGAAT CTTCGGGTAA CTATGTAAAA
ATTTGCCTTG AAAGAACGGC ATTTATTGCC AGACAAACAT TAACTGGCGT ACAGAGTCAG
TTAGACCCCA CTATTTTTGT ACGCATACAC CGTTCGCACG TGATCAATAT TAATGAAGTT
ATTCAAGTGA CTCCCATTAG CAAAGGTGAT CATACCTTAC AGCTAAGATC AGGAACTGAA
CTAAGGTTAT CTCGAGCTTA CCAAGAGAAC TTCTTTAAGG TATTCAACCT TACCTCAATA
TAA
 
Protein sequence
MSELAQVSSS YKVLVVDDEP AARQKLIHFL KEHSDFDVVA EARNGVEALE CIDKFTPSLV 
FLDIQMPKLD GISVASNLEF NKEVSIVFVT GFNEYAISAF ELNAVDYLLK PYDKARLAKT
LNRFREFSGT TQKFDIPKLV QDYRTDQHYP KTLLFKAEGS IEVAKADEVQ WIESSGNYVK
ICLERTAFIA RQTLTGVQSQ LDPTIFVRIH RSHVININEV IQVTPISKGD HTLQLRSGTE
LRLSRAYQEN FFKVFNLTSI