| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0114 |
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| Symbol | |
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| ID | 5297330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 116610 |
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| End bp | 117290 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640768365 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001305376 |
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| Protein GI | 150020022 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.310837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAGGG TAGTAATAAT TGATGATGAG TATTATGCCA GAGAAATGTT AAAAGATTTA
ATTATACAAA TTACACCATT TGAACTAAAA GGATGCTTTG AAAGTGTTGA GGAATTTTTA
AAAAGTAAAA TAAAAAATGA GGTTGATGTT ATTTTTCTTG ACATTGAAAT GCCAAGAATA
AATGGTATTA AAGCAGCAAA ATACCTTGAG CGGTATAAAG TGGTGTTTGT TACTGCTTAT
TCAGAGTATG CAGTAAACGC ATTTGAAGTT AATGCTTTAG ATTATTTAAC TAAGCCTATT
TCTGAGGTAA GGTTTATCGA AACAATGCGG AGAATAGAAG AAGTTTTTAG AGATAAAAAA
TTAGTAAAGA TTTCGGTGGA AAATAACAAA GAGATAGTAT TTTTGGATTT TAGTGATGTA
TATTTTTTTG AATATTTTGA AAAAAGGATT TTGGTAATTA CTGACAAAGG AGAATTTGTA
TTAAAACATT TTAAAAACCT AAGCAAATTA GAAAAAGAGC TTCCATCTAA TTTTATAAGA
GTGCATAAAT CTTACATTGT AAACATCGAT TATGTTGAAA GATTTATTAA AAATTTAAAC
TCCCTCCAAT TAAAAGGTGG CAAGATTATT CCAATTGGTA AAACACATAT AAGAGATATA
AGAAATGTAT TAAAAATTTA A
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| Protein sequence | MIRVVIIDDE YYAREMLKDL IIQITPFELK GCFESVEEFL KSKIKNEVDV IFLDIEMPRI
NGIKAAKYLE RYKVVFVTAY SEYAVNAFEV NALDYLTKPI SEVRFIETMR RIEEVFRDKK
LVKISVENNK EIVFLDFSDV YFFEYFEKRI LVITDKGEFV LKHFKNLSKL EKELPSNFIR
VHKSYIVNID YVERFIKNLN SLQLKGGKII PIGKTHIRDI RNVLKI
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