| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1323 |
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| Symbol | |
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| ID | 8414208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1486396 |
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| End bp | 1487109 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022920 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003180338 |
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| Protein GI | 257785121 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0540721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0273831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGCCA TGATTGTTGA CGACGAGGCT CCAGCCCGTT CTGAGCTTAA GTTCTTACTT
GAGGAAACTG GTCGTCTCGA AGAAATCATT GAGGCCACAA GTGCAAGGGA TGCTGTCGAG
AAACTCATGG AGTCTCGTGT TGAGGTTATA TTCCTTGATA TCTCTATGCC TAAGACAAAT
GGAATGCAGC TTGCAGAGGC TCTTCACAAG TTGAAGAATC CTCCTCAGAT TGTGTTTGTT
ACCGCATATA GTGAGTATGC ATTGGATGCA TTTGGCGTTA ATGCTGTCGA TTACCTAATG
AAGCCTGTTG AGACCGAGCG TCTTGAGCAG GCTCTTGATA AGGTTGAGGA GCGCCTACGT
CCTCAGTCTC CTATGGCAAC CATTGAGCGA ATTCCCGTCA TTAAGAGTGG AAGCAAAGTT
CTTGTTCCTA TTGATCAGAT TCGCTTTATT GAAGCAAAAG ACGATTATTC TTGCATTTAT
ACAGAAGACG ATCGCTTCCT ATCTACCATT TCTTTGCAAA AACTTGAAGA GCGCCTTGCT
CCACACGGAT TCTTCCGCAT TCATCGTAGC TTTATCGTGA ATCTTGAGTA TGTTGACGAT
GTTGAGGTTA TCTCTGCTGG TATCCTTCAG TTGACTATTC AGGGATTTGA GGAGCGTCAC
ATCTCGGTTT CTCGCCGTCG TGTGGTCGCA CTCAAGCGAG CGTTGGGACT GTAG
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| Protein sequence | MRAMIVDDEA PARSELKFLL EETGRLEEII EATSARDAVE KLMESRVEVI FLDISMPKTN
GMQLAEALHK LKNPPQIVFV TAYSEYALDA FGVNAVDYLM KPVETERLEQ ALDKVEERLR
PQSPMATIER IPVIKSGSKV LVPIDQIRFI EAKDDYSCIY TEDDRFLSTI SLQKLEERLA
PHGFFRIHRS FIVNLEYVDD VEVISAGILQ LTIQGFEERH ISVSRRRVVA LKRALGL
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