More than 300 homologs were found in PanDaTox collection
for query gene DehaBAV1_0821 on replicon NC_009455
Organism: Dehalococcoides sp. BAV1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009455  DehaBAV1_0821  thioesterase superfamily protein  100 
 
 
136 aa  270  6e-72  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_808  thioesterase  94.85 
 
 
136 aa  262  1e-69  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0937  thioesterase family protein  94.12 
 
 
136 aa  257  4e-68  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0346835  n/a   
 
 
-
 
NC_007347  Reut_A3016  phenylacetic acid degradation-related protein:phenylacetic acid degradation protein PaaD  43.27 
 
 
178 aa  88.6  3e-17  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2751  phenylacetic acid degradation protein PaaD  37.4 
 
 
153 aa  85.5  2e-16  Ralstonia pickettii 12D  Bacteria  hitchhiker  0.00224854  normal 
 
 
-
 
NC_007510  Bcep18194_A3627  phenylacetic acid degradation protein PaaD  39.22 
 
 
150 aa  85.1  3e-16  Burkholderia sp. 383  Bacteria  normal  0.0218071  normal 
 
 
-
 
NC_008390  Bamb_0445  phenylacetic acid degradation protein PaaD  38.24 
 
 
150 aa  84.7  4e-16  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3116  phenylacetic acid degradation protein PaaD  36.59 
 
 
153 aa  84.3  5e-16  Ralstonia pickettii 12J  Bacteria  hitchhiker  0.00121794  normal  0.101093 
 
 
-
 
NC_007651  BTH_I2903  phenylacetic acid degradation protein PaaD  39.22 
 
 
154 aa  83.6  8e-16  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00325077  n/a   
 
 
-
 
NC_007973  Rmet_3164  phenylacetic acid degradation protein PaaD  37.27 
 
 
146 aa  82.8  0.000000000000002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000726933  normal 
 
 
-
 
NC_010551  BamMC406_0470  phenylacetic acid degradation protein PaaD  38.24 
 
 
150 aa  82  0.000000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0904963  normal 
 
 
-
 
NC_010622  Bphy_2692  phenylacetic acid degradation protein PaaD  39.22 
 
 
153 aa  82  0.000000000000003  Burkholderia phymatum STM815  Bacteria  normal  0.250107  normal 
 
 
-
 
NC_003295  RSc2874  phenylacetic acid degradation protein  33.61 
 
 
155 aa  81.3  0.000000000000004  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00122895  normal 
 
 
-
 
NC_008060  Bcen_2565  phenylacetic acid degradation protein PaaD  38.24 
 
 
150 aa  80.5  0.000000000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0540  phenylacetic acid degradation protein PaaD  38.24 
 
 
150 aa  80.5  0.000000000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.460721  n/a   
 
 
-
 
NC_010508  Bcenmc03_0512  phenylacetic acid degradation protein PaaD  38.24 
 
 
150 aa  80.5  0.000000000000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.245476  normal  0.787837 
 
 
-
 
NC_009076  BURPS1106A_3576  phenylacetic acid degradation protein PaaD  38.24 
 
 
158 aa  80.1  0.000000000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3549  phenylacetic acid degradation protein PaaD  38.24 
 
 
158 aa  80.1  0.000000000000009  Burkholderia pseudomallei 668  Bacteria  normal  0.0916225  n/a   
 
 
-
 
NC_007434  BURPS1710b_3567  phenylacetic acid degradation protein PaaI  38.24 
 
 
251 aa  80.1  0.00000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.060136  n/a   
 
 
-
 
NC_007951  Bxe_A0467  phenylacetic acid degradation- related thioesterase (PaaI)  36.27 
 
 
153 aa  77.4  0.00000000000007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3489  phenylacetic acid degradation protein PaaD  36.27 
 
 
153 aa  76.3  0.0000000000001  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00562362  hitchhiker  0.000228083 
 
 
-
 
NC_010524  Lcho_2404  phenylacetic acid degradation protein PaaD  35.19 
 
 
150 aa  75.9  0.0000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.671288 
 
 
-
 
NC_012791  Vapar_1237  phenylacetic acid degradation protein PaaD  34.31 
 
 
147 aa  75.9  0.0000000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0569  phenylacetic acid degradation protein PaaD  32.79 
 
 
155 aa  75.9  0.0000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1553  thioesterase superfamily protein  30.47 
 
 
146 aa  75.1  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2854  phenylacetic acid degradation protein PaaD  37.86 
 
 
152 aa  75.1  0.0000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0283833  normal  0.621321 
 
 
-
 
NC_013216  Dtox_1384  thioesterase superfamily protein  38.68 
 
 
137 aa  75.1  0.0000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00487893 
 
 
-
 
NC_008553  Mthe_0286  hypothetical protein  35 
 
 
132 aa  75.1  0.0000000000003  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007298  Daro_0373  phenylacetic acid degradation-related protein:phenylacetic acid degradation protein PaaD  37.4 
 
 
156 aa  74.7  0.0000000000004  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000000506078  hitchhiker  0.00000423415 
 
 
-
 
NC_011662  Tmz1t_1510  phenylacetic acid degradation protein PaaD  35.2 
 
 
155 aa  74.7  0.0000000000004  Thauera sp. MZ1T  Bacteria  normal  0.269892  n/a   
 
 
-
 
NC_002947  PP_3281  phenylacetic acid degradation protein PaaD  33.33 
 
 
146 aa  74.3  0.0000000000005  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2478  phenylacetic acid degradation protein PaaD  33.33 
 
 
146 aa  74.3  0.0000000000005  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3080  phenylacetic acid degradation protein PaaD  35.29 
 
 
146 aa  74.3  0.0000000000005  Serratia proteamaculans 568  Bacteria  normal  normal  0.378312 
 
 
-
 
NC_008709  Ping_0658  phenylacetic acid degradation protein PaaD  37.27 
 
 
146 aa  73.2  0.000000000001  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3943  phenylacetic acid degradation protein PaaD  35.65 
 
 
152 aa  72.8  0.000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.545833 
 
 
-
 
CP001637  EcDH1_2249  phenylacetic acid degradation protein PaaD  33.07 
 
 
140 aa  72.8  0.000000000002  Escherichia coli DH1  Bacteria  normal  0.0320405  n/a   
 
 
-
 
NC_009943  Dole_1498  thioesterase superfamily protein  32.35 
 
 
149 aa  72.8  0.000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0751  phenylacetic acid degradation protein PaaD  36.21 
 
 
149 aa  72.4  0.000000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.117185  normal  0.261303 
 
 
-
 
NC_009485  BBta_2871  phenylacetic acid degradation protein  37.86 
 
 
152 aa  72.4  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.165217  normal  0.133325 
 
 
-
 
NC_007644  Moth_0402  phenylacetic acid degradation protein PaaD  40.2 
 
 
134 aa  72  0.000000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.925599  decreased coverage  0.0065275 
 
 
-
 
NC_007778  RPB_3635  phenylacetic acid degradation protein PaaD  38.83 
 
 
157 aa  72.8  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.182413  normal  0.29852 
 
 
-
 
NC_009801  EcE24377A_1581  phenylacetic acid degradation protein PaaD  33.07 
 
 
140 aa  72.8  0.000000000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1483  phenylacetic acid degradation protein PaaD  33.07 
 
 
140 aa  72.8  0.000000000002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0467  thioesterase superfamily protein  33.04 
 
 
146 aa  72  0.000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.492542  n/a   
 
 
-
 
NC_010468  EcolC_2259  phenylacetic acid degradation protein PaaD  33.07 
 
 
140 aa  72.8  0.000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.059519  normal 
 
 
-
 
NC_007958  RPD_1830  phenylacetic acid degradation protein PaaD  39.81 
 
 
150 aa  71.2  0.000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.307923  normal 
 
 
-
 
NC_010322  PputGB1_2615  phenylacetic acid degradation protein PaaD  32.41 
 
 
146 aa  70.9  0.000000000006  Pseudomonas putida GB-1  Bacteria  normal  0.518393  normal  0.199542 
 
 
-
 
NC_008825  Mpe_A0985  phenylacetic acid degradation protein  32.41 
 
 
150 aa  70.1  0.000000000009  Methylibium petroleiphilum PM1  Bacteria  normal  0.594777  normal 
 
 
-
 
NC_010501  PputW619_2628  phenylacetic acid degradation protein PaaD  33.33 
 
 
151 aa  69.7  0.00000000001  Pseudomonas putida W619  Bacteria  normal  0.45641  normal  0.0525731 
 
 
-
 
NC_008554  Sfum_0232  hypothetical protein  34.17 
 
 
142 aa  69.7  0.00000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000358883  normal  0.422713 
 
 
-
 
NC_009485  BBta_2322  thioesterase superfamily protein  35.04 
 
 
140 aa  68.6  0.00000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0478  phenylacetic acid degradation protein PaaD  33.33 
 
 
153 aa  68.9  0.00000000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0439  phenylacetic acid degradation protein PaaD  32.73 
 
 
143 aa  68.9  0.00000000002  Ruegeria sp. TM1040  Bacteria  normal  0.778856  normal 
 
 
-
 
NC_009972  Haur_0904  thioesterase superfamily protein  36.63 
 
 
141 aa  68.6  0.00000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1701  thioesterase superfamily protein  33.86 
 
 
142 aa  68.2  0.00000000004  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000000649367  n/a   
 
 
-
 
NC_007802  Jann_0657  phenylacetic acid degradation protein PaaD  33.03 
 
 
143 aa  67.8  0.00000000005  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1660  phenylacetic acid degradation protein PaaD  33.6 
 
 
164 aa  67  0.00000000008  Acidothermus cellulolyticus 11B  Bacteria  normal  0.388826  normal  0.270829 
 
 
-
 
NC_008346  Swol_1130  uncharacterized aromatic compound catabolism protein  26.98 
 
 
143 aa  66.6  0.0000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2152  thioesterase superfamily protein  36.45 
 
 
144 aa  65.9  0.0000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008701  Pisl_1354  hypothetical protein  31.53 
 
 
138 aa  66.2  0.0000000002  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0730  thioesterase superfamily protein  33.33 
 
 
155 aa  65.9  0.0000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009956  Dshi_3825  phenylacetic acid degradation protein PaaD  27.93 
 
 
141 aa  65.5  0.0000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.17422  normal  0.478257 
 
 
-
 
NC_007964  Nham_0937  phenylacetic acid degradation protein PaaD  30.08 
 
 
149 aa  65.5  0.0000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2253  phenylacetic acid degradation-related protein  32.82 
 
 
147 aa  65.1  0.0000000003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  3.9321e-16  hitchhiker  0.00000000000000125506 
 
 
-
 
NC_011004  Rpal_1924  phenylacetic acid degradation protein PaaD  36.08 
 
 
157 aa  64.7  0.0000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.082152  n/a   
 
 
-
 
NC_008025  Dgeo_0297  phenylacetic acid degradation protein PaaD  36.19 
 
 
123 aa  64.7  0.0000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1324  phenylacetic acid degradation protein PaaD  33.94 
 
 
124 aa  64.7  0.0000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0859981 
 
 
-
 
NC_008688  Pden_4800  phenylacetic acid degradation protein PaaD  29.36 
 
 
154 aa  64.3  0.0000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.283675  normal  0.204675 
 
 
-
 
NC_009253  Dred_0152  thioesterase superfamily protein  31.78 
 
 
134 aa  64.3  0.0000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  0.149179  n/a   
 
 
-
 
CP001800  Ssol_2211  thioesterase superfamily protein  32.77 
 
 
150 aa  63.9  0.0000000007  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009720  Xaut_0902  phenylacetic acid degradation protein PaaD  34.55 
 
 
165 aa  63.5  0.0000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_5041  phenylacetic acid degradation protein PaaD  33.33 
 
 
153 aa  62.8  0.000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0682  phenylacetic acid degradation protein PaaD  38.3 
 
 
158 aa  63.2  0.000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.977653 
 
 
-
 
NC_010505  Mrad2831_4670  thioesterase superfamily protein  32.46 
 
 
137 aa  62.8  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.614434 
 
 
-
 
NC_012918  GM21_1977  thioesterase superfamily protein  30.33 
 
 
140 aa  62.8  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_1737  thioesterase superfamily protein  33.93 
 
 
131 aa  62  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  unclonable  0.000000190297  n/a   
 
 
-
 
NC_008752  Aave_2878  hypothetical protein  33 
 
 
158 aa  62.8  0.000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2334  phenylacetic acid degradation-related protein  33.01 
 
 
148 aa  62.4  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.788653  n/a   
 
 
-
 
NC_011894  Mnod_3366  phenylacetic acid degradation protein PaaD  34.19 
 
 
154 aa  62.4  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.27764  n/a   
 
 
-
 
NC_008686  Pden_0692  hypothetical protein  32.38 
 
 
136 aa  61.2  0.000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.288837  normal  0.347955 
 
 
-
 
NC_007951  Bxe_A2270  phenylacetic acid degradation-related protein  29.73 
 
 
161 aa  61.2  0.000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.552661  normal  0.164654 
 
 
-
 
NC_014212  Mesil_2320  phenylacetic acid degradation protein PaaD  31.19 
 
 
125 aa  61.2  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3098  phenylacetic acid degradation protein PaaD  31.15 
 
 
154 aa  61.2  0.000000005  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.000278086 
 
 
-
 
NC_008346  Swol_0025  hypothetical protein  31.45 
 
 
142 aa  61.2  0.000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.000180686  n/a   
 
 
-
 
NC_008686  Pden_1441  hypothetical protein  31.15 
 
 
153 aa  60.8  0.000000007  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_0432  thioesterase superfamily protein  30.7 
 
 
121 aa  60.5  0.000000008  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_013124  Afer_1371  phenylacetic acid degradation protein PaaD  36.27 
 
 
145 aa  60.5  0.000000008  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.154408  n/a   
 
 
-
 
NC_013235  Namu_2481  phenylacetic acid degradation protein PaaD  32.04 
 
 
160 aa  60.5  0.000000008  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000323431  hitchhiker  0.00762361 
 
 
-
 
NC_010510  Mrad2831_5999  thioesterase superfamily protein  29.37 
 
 
181 aa  59.7  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1374  thioesterase superfamily protein  29.73 
 
 
159 aa  58.9  0.00000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0539.1  hypothetical protein  34.44 
 
 
159 aa  59.3  0.00000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0622463  n/a   
 
 
-
 
NC_007510  Bcep18194_A5199  phenylacetic acid degradation-related protein  31.53 
 
 
159 aa  59.3  0.00000002  Burkholderia sp. 383  Bacteria  normal  normal  0.354214 
 
 
-
 
NC_009943  Dole_0386  thioesterase superfamily protein  32.35 
 
 
130 aa  59.3  0.00000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0460  thioesterase superfamily protein  29.46 
 
 
138 aa  58.9  0.00000002  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000000488962  n/a   
 
 
-
 
NC_010506  Swoo_0223  thioesterase superfamily protein  29.13 
 
 
158 aa  58.5  0.00000003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.103741 
 
 
-
 
NC_008835  BMA10229_0934  hypothetical protein  36.9 
 
 
104 aa  58.5  0.00000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.431465  n/a   
 
 
-
 
NC_007644  Moth_1795  phenylacetic acid degradation-related protein  28.07 
 
 
161 aa  58.5  0.00000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.560349  normal 
 
 
-
 
NC_008542  Bcen2424_1899  hypothetical protein  30.63 
 
 
159 aa  58.5  0.00000003  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1922  thioesterase superfamily protein  30.63 
 
 
159 aa  58.5  0.00000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.411154 
 
 
-
 
NC_010531  Pnec_1001  thioesterase superfamily protein  31.86 
 
 
137 aa  58.5  0.00000003  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
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