| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0386 |
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| Symbol | |
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| ID | 5693205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 445209 |
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| End bp | 445601 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641262967 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001528273 |
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| Protein GI | 158520403 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACGC CCATTATTTC GGCGGTCAAT AAAGACCGGT TTGTAAAAGA GATCGGCATT
GAGCTGGTCA CGGTGTCAGC GGGATACGCC AAAACCCGGA TGACAGTGGA GCCACGGCAC
TTAAACGGCC TGGACCTGGG CCACGGCGGT GCTGTTTTTA CCCTGGCCGA CTACGCCTTT
GCCGCGGCTT CCAACTCCCA TGGCGTGGAC GCCGTGGCCA TCAACATCAC CATGTCCTAT
TTCAAGGCGG CCAGGGCCGG GGACGAGCTT ACCGCCGAGG CCAAAGAGAT CGCCTTAAGC
CGAAAGATCG GCACCTATGC CATTTCGGTC TTCAACCAGA ACCAGGACAC GGTGGCCTTC
ATGCAGGGCA CGGCTTTTCG CAAAACCCCC TGA
|
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| Protein sequence | METPIISAVN KDRFVKEIGI ELVTVSAGYA KTRMTVEPRH LNGLDLGHGG AVFTLADYAF
AAASNSHGVD AVAINITMSY FKAARAGDEL TAEAKEIALS RKIGTYAISV FNQNQDTVAF
MQGTAFRKTP
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