| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0439 |
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| Symbol | |
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| ID | 4076082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 456106 |
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| End bp | 456537 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005735 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_612434 |
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| Protein GI | 99080280 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.778856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTGA CCGCACAACA ACGGGCAGAG AAATCCGCAC AGGCCATGTG GGCCGACGAT
CAGGCGTCCA AATGGGCCGG CATGGGCATC GAACGTGTCG ACGAGGGCAG TGCCGCGCTG
GCCCTGACCG TCGAAGCGCA TCACTGCAAC GGCCATGGGA TCTGCCATGG CGGCGTGATC
TTCATGCTCG CCGACAGCGC CTTTGCCTTT GCCTGTAACA GCCGCAACCA GGCGACGGTG
GCGCAGCACA ATATGATCAG CTTTATCGCG CCAGGTCGCA AAGGCGACAG GCTACTGGCC
GAGGCGCGTG AGGTTTCTCT GACCGGGCGC AGCGGCATCT ATGACGTGAG CGTCAAGAAT
CAGGACGGGC AGCTGATTGC AGAGATGCGT GGCTGCTCGC GCGCGATCAA GGGACACCTC
TTCGAGGAAT GA
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| Protein sequence | MSLTAQQRAE KSAQAMWADD QASKWAGMGI ERVDEGSAAL ALTVEAHHCN GHGICHGGVI
FMLADSAFAF ACNSRNQATV AQHNMISFIA PGRKGDRLLA EAREVSLTGR SGIYDVSVKN
QDGQLIAEMR GCSRAIKGHL FEE
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