Gene BMAA0539.1 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0539.1 
Symbol 
ID3086860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp549166 
End bp549645 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID637564458 
Producthypothetical protein 
Protein accessionYP_105308 
Protein GI53717638 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0622463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGAGATGGC CGCACGCTCT CCCGAACGCT CGCCAACGGC GACCGCAGAA CGCTCCGCCG 
AAGCGCTCGC CCGCGCAACC GCCGAAGCAA TGTACGCCGC GGACGCCTGC AGCCGCAGCC
TCGGCATCGA GGTGCTCGAA GTGCGGCCGG GCTACGCGCG CGCGCATGCC CGTGCGCGGC
GATTTTCTGA ACGGTCACCA GATCTGCCAT GGTGGGCTCG TCTTCACGCT CGCGGATTCG
ACCTTCGCGT TCGCCTGCAA CTCGTACAAC ATCAATACGG TCGCAGCCGG CTGCTCGATC
GAATTCCTGC GCCCGGTGGC GGGCGGCGAC GTGCTCACCG CGGAAGCGAC GGAGCAGACG
CTGAACGGCC GGCACGGCAT CTACGATATT CGCGTAACGA ATCGGGCGGG AGAAACCGTC
GCGATGTTCC GCGGCAAGTC GACTCAAATC AAAGGGACGG TGATCCCTGT AGACCGTTAG
 
Protein sequence
MRWPHALPNA RQRRPQNAPP KRSPAQPPKQ CTPRTPAAAA SASRCSKCGR ATRARMPVRG 
DFLNGHQICH GGLVFTLADS TFAFACNSYN INTVAAGCSI EFLRPVAGGD VLTAEATEQT
LNGRHGIYDI RVTNRAGETV AMFRGKSTQI KGTVIPVDR